Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS09960 | Not Available | + | 2147841 - 2148616 | 27595.0 |
| fimbria/pilus outer membrane usher protein | E6B08_RS09965 | Not Available | + | 2148721 - 2151021 | 82995.8 |
| spore coat protein u domain-containing protein | E6B08_RS09970 | Not Available | + | 2151018 - 2151989 | 33550.4 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS09975 | Not Available | - | 2152057 - 2153204 | 42527.8 |
| paar domain-containing protein | E6B08_RS09980 | Not Available | - | 2153290 - 2153547 | 8610.24 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS09985 | Not Available | + | 2153535 - 2155967 | 90333.6 |
| duf6392 family protein | E6B08_RS09990 | Not Available | + | 2156177 - 2156656 | 17601.1 |
| duf4880 domain-containing protein | E6B08_RS09995 | Not Available | - | 2156740 - 2157255 | 19100.0 |
| duf6124 family protein | E6B08_RS10000 | Not Available | - | 2157666 - 2157992 | 12026.5 |
| lexa family protein | E6B08_RS10005 | Not Available | + | 2158121 - 2158777 | 24581.5 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



