Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminodeoxychorismate synthase component i | E6B08_RS09810 | Not Available | - | 2113643 - 2114986 | 49494.8 |
| alpha-l-glutamate ligase-like protein | E6B08_RS09815 | Not Available | - | 2115187 - 2116167 | 35981.7 |
| inactive transglutaminase family protein | E6B08_RS09820 | Not Available | - | 2116167 - 2117702 | 57011.2 |
| atp-dependent zinc protease | E6B08_RS09825 | Not Available | - | 2117708 - 2118244 | 19344.5 |
| gntr family transcriptional regulator | E6B08_RS09830 | Not Available | + | 2118539 - 2119255 | 27055.2 |
| methylisocitrate lyase | E6B08_RS09835 | Not Available | + | 2119252 - 2120142 | 31799.2 |
| 2-methylcitrate synthase | E6B08_RS09840 | Not Available | + | 2120227 - 2121354 | 41970.4 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | E6B08_RS09845 | Not Available | + | 2121521 - 2124109 | 94195.6 |
| 2-methylaconitate cis-trans isomerase prpf | E6B08_RS09850 | Not Available | + | 2124273 - 2125463 | 41284.3 |
| 2-methylcitrate dehydratase | E6B08_RS09855 | Not Available | + | 2125611 - 2127095 | 54808.8 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



