Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| quinone-dependent dihydroorotate dehydrogenase | E6B08_RS08825 | Not Available | + | 1852476 - 1853501 | 35596.3 |
| ribosome modulation factor | E6B08_RS08830 | Not Available | - | 1853597 - 1853812 | 8160.62 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | E6B08_RS08835 | Not Available | + | 1854374 - 1856566 | 82153.1 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS08840 | Not Available | + | 1856658 - 1859026 | 84017.4 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS08850 | Not Available | - | 1859810 - 1861266 | 51380.2 |
| yggl family protein | E6B08_RS08855 | Not Available | + | 1861454 - 1861798 | 12775.0 |
| transporter substrate-binding domain-containing protein | E6B08_RS08860 | Not Available | - | 1861844 - 1865458 | 132884.0 |
| response regulator transcription factor | E6B08_RS08865 | Not Available | - | 1865468 - 1866088 | 22786.9 |
| deoxyguanosinetriphosphate triphosphohydrolase | E6B08_RS08870 | Not Available | - | 1866365 - 1867696 | 49933.6 |
| hypothetical protein | E6B08_RS08875 | Not Available | - | 1867773 - 1868105 | 12295.5 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



