Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | E6B08_RS08210 | Not Available | + | 1721288 - 1721911 | 23605.1 |
| abc transporter atp-binding protein | E6B08_RS08215 | Not Available | + | 1722056 - 1722988 | 34411.9 |
| abc transporter permease | E6B08_RS08220 | Not Available | + | 1722985 - 1723764 | 28617.0 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS08225 | Not Available | - | 1723768 - 1724280 | 19921.0 |
| dna internalization-related competence protein comec/rec2 | E6B08_RS08230 | Not Available | + | 1724424 - 1726640 | 80143.5 |
| mota/tolq/exbb proton channel family protein | E6B08_RS08235 | Not Available | + | 1727066 - 1727701 | 22804.5 |
| exbd/tolr family protein | E6B08_RS08240 | Not Available | + | 1727698 - 1728132 | 15708.7 |
| tetraacyldisaccharide 4'-kinase | E6B08_RS08245 | Not Available | + | 1728132 - 1729154 | 37606.4 |
| trm112 family protein | E6B08_RS08250 | Not Available | + | 1729198 - 1729383 | 6642.14 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | E6B08_RS08255 | Not Available | + | 1729380 - 1730144 | 27516.0 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



