Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ycik family oxidoreductase | E6B08_RS07600 | Not Available | - | 1594650 - 1595390 | 26461.7 |
| n-acetylmuramic acid 6-phosphate phosphatase mupp | E6B08_RS07605 | Not Available | - | 1595556 - 1596227 | 24345.4 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | E6B08_RS07610 | Not Available | - | 1596230 - 1596928 | 25953.3 |
| s-methyl-5-thioribose-1-phosphate isomerase | E6B08_RS07615 | Not Available | + | 1597039 - 1598115 | 38950.0 |
| dna gyrase subunit a | E6B08_RS07620 | Not Available | + | 1598399 - 1601161 | 101520.0 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | E6B08_RS07625 | Not Available | + | 1601403 - 1602488 | 39911.3 |
| prephenate dehydratase | E6B08_RS07630 | Not Available | + | 1602488 - 1603582 | 40362.5 |
| bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase | E6B08_RS07635 | Not Available | + | 1603745 - 1605952 | 77859.1 |
| (d)cmp kinase | E6B08_RS07640 | Not Available | + | 1605949 - 1606635 | 24671.7 |
| 30s ribosomal protein s1 | E6B08_RS07645 | Not Available | + | 1606760 - 1608436 | 61545.1 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



