Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | E6B08_RS07290 | Not Available | - | 1527187 - 1527951 | 26875.4 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS07295 | Not Available | - | 1527980 - 1528689 | 25369.4 |
| mfs transporter | E6B08_RS07300 | Not Available | - | 1528899 - 1530239 | 48411.7 |
| helix-turn-helix transcriptional regulator | E6B08_RS07305 | Not Available | + | 1530690 - 1531619 | 35920.2 |
| pca operon transcription factor pcaq | E6B08_RS07310 | Not Available | + | 1531629 - 1532561 | 33901.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | E6B08_RS07315 | Not Available | + | 1532799 - 1533548 | 26297.5 |
| type ii toxin-antitoxin system hipa family toxin | E6B08_RS07320 | Not Available | + | 1533805 - 1534244 | 15525.9 |
| is4 family transposase | E6B08_RS07325 | Not Available | + | 1535070 - 1536371 | 48523.7 |
| multiprotein-bridging factor 1 family protein | E6B08_RS07330 | Not Available | + | 1536606 - 1536944 | 11796.0 |
| hypothetical protein | E6B08_RS07335 | Not Available | + | 1536941 - 1537309 | 13985.8 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



