Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath large subunit | E6B08_RS06780 | Not Available | - | 1416127 - 1417623 | 55516.2 |
| type vi secretion system contractile sheath small subunit | E6B08_RS06785 | Not Available | - | 1417635 - 1418150 | 18685.5 |
| type vi secretion system protein tssa | E6B08_RS06790 | Not Available | - | 1418223 - 1419254 | 37264.6 |
| type vi secretion system-associated fha domain protein tagh | E6B08_RS06795 | Not Available | + | 1419648 - 1421057 | 50266.8 |
| type vi secretion system lipoprotein tssj | E6B08_RS06800 | Not Available | + | 1421097 - 1421594 | 17478.9 |
| type vi secretion system baseplate subunit tssk | E6B08_RS06805 | Not Available | + | 1421610 - 1422944 | 48548.1 |
| dotu family type vi secretion system protein | E6B08_RS06810 | Not Available | + | 1423168 - 1424481 | 47458.1 |
| type vi secretion system membrane subunit tssm | E6B08_RS06815 | Not Available | + | 1424478 - 1427987 | 128430.0 |
| type vi secretion system-associated protein tagf | E6B08_RS06820 | Not Available | + | 1427984 - 1428640 | 23253.7 |
| pp2c family protein-serine/threonine phosphatase | E6B08_RS06825 | Not Available | + | 1428637 - 1429356 | 25801.6 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



