Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E6B08_RS06730 | Not Available | - | 1401254 - 1401775 | 19988.4 |
| hypothetical protein | E6B08_RS06735 | Not Available | - | 1401948 - 1402610 | 24637.0 |
| rhs repeat-associated core domain-containing protein | E6B08_RS06740 | Not Available | - | 1402613 - 1406971 | 162662.0 |
| dcrb-related protein | E6B08_RS06745 | Not Available | - | 1406981 - 1407415 | 15812.0 |
| type vi secretion system tip protein vgrg | E6B08_RS06750 | Not Available | - | 1407428 - 1409365 | 72575.9 |
| type vi secretion system atpase tssh | E6B08_RS06755 | Not Available | - | 1409377 - 1412052 | 97328.0 |
| type vi secretion system baseplate subunit tssg | E6B08_RS06760 | Not Available | - | 1412045 - 1413094 | 39237.3 |
| type vi secretion system baseplate subunit tssf | E6B08_RS06765 | Not Available | - | 1413058 - 1414920 | 69410.8 |
| type vi secretion system baseplate subunit tsse | E6B08_RS06770 | Not Available | - | 1414917 - 1415432 | 18397.9 |
| hcp family type vi secretion system effector | E6B08_RS06775 | Not Available | - | 1415595 - 1416083 | 17529.8 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



