Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hdod domain-containing protein | E6B08_RS06040 | Not Available | - | 1239935 - 1240741 | 29612.9 |
| ygfz/gcvt domain-containing protein | E6B08_RS06045 | Not Available | - | 1240796 - 1241737 | 33476.3 |
| succinate dehydrogenase assembly factor 2 | E6B08_RS06050 | Not Available | + | 1241873 - 1242127 | 10190.3 |
| protein ygfx | E6B08_RS06055 | Not Available | + | 1242111 - 1242569 | 17214.1 |
| l-aspartate oxidase | E6B08_RS06060 | Not Available | - | 1242556 - 1244160 | 59255.5 |
| rna polymerase sigma factor rpoe | E6B08_RS06065 | Not Available | + | 1244596 - 1245177 | 22283.3 |
| sigma-e factor negative regulatory protein | E6B08_RS06070 | Not Available | + | 1245209 - 1245799 | 20939.6 |
| mucb/rseb c-terminal domain-containing protein | E6B08_RS06075 | Not Available | + | 1245812 - 1246783 | 35168.7 |
| degq family serine endoprotease | E6B08_RS06080 | Not Available | + | 1246961 - 1248391 | 50703.0 |
| translation elongation factor 4 | E6B08_RS06085 | Not Available | + | 1248575 - 1250374 | 66129.8 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



