Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida str. 1290
Accession NumberNZ_CP039371.1
Gene Summary
Adenine Count
1197846 bp
Thymine Count
1196632 bp
Guanine Count
2050461 bp
Cytosine Count
2050947 bp
Genome Length
6495886 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan d,d-transpeptidase ftsi family protein | E6B08_RS05375 | Not Available | + | 1088766 - 1090514 | 63286.5 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | E6B08_RS05380 | Not Available | + | 1090514 - 1092001 | 53315.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | E6B08_RS05385 | Not Available | + | 1091994 - 1093361 | 46918.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | E6B08_RS05390 | Not Available | + | 1093361 - 1094443 | 39374.4 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | E6B08_RS05395 | Not Available | + | 1094450 - 1095796 | 48120.8 |
| putative lipid ii flippase ftsw | E6B08_RS05400 | Not Available | + | 1095796 - 1097007 | 44040.9 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | E6B08_RS05405 | Not Available | + | 1096997 - 1098076 | 38075.6 |
| udp-n-acetylmuramate--l-alanine ligase | E6B08_RS05410 | Not Available | + | 1098069 - 1099517 | 52100.9 |
| d-alanine--d-alanine ligase | E6B08_RS05415 | Not Available | + | 1099514 - 1100470 | 34135.9 |
| cell division protein ftsq/divib | E6B08_RS05420 | Not Available | + | 1100476 - 1101345 | 32293.3 |
Pathways
24 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
lignin metabolism
lignin metabolism



