Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas fragi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas fragi
Accession NumberNQKL00000000.1
Gene Summary
Adenine Count
1101078 bp
Thymine Count
1083773 bp
Guanine Count
1499436 bp
Cytosine Count
1531690 bp
Genome Length
5215977 bp
Protein-coding Genes
4621 genes
Non-Coding Genes
222 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | CJF43_10060 | Not Available | + | 2115442 - 2117403 | 71642.5 |
| type iii secretion protein | CJF43_10065 | Not Available | + | 2117400 - 2117606 | 7437.05 |
| avre family type 3 secretion system effector | CJF43_10070 | Not Available | - | 2117642 - 2121961 | 155747.0 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | CJF43_10080 | Not Available | - | 2123117 - 2123914 | 28755.4 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | CJF43_10085 | Not Available | - | 2123927 - 2124187 | 9140.75 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | CJF43_10090 | Not Available | - | 2124195 - 2124848 | 23668.2 |
| type iii secretion protein | CJF43_10095 | Not Available | - | 2124845 - 2125840 | 35813.4 |
| flagellar hook-length control protein flik | CJF43_10100 | Not Available | - | 2125840 - 2126193 | 13019.7 |
| hypothetical protein | CJF43_10105 | Not Available | - | 2126205 - 2126651 | 16917.8 |
| flagellum-specific atp synthase flii | CJF43_10110 | Not Available | - | 2126638 - 2127996 | 48867.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
