Pseudomonas fluorescens

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens is a gram-negative, rod-shaped bacterium that thrives in a wide range of environments with temperatures between 10°C and 40°C, classified as a thermotolerant microbe. As a chemoheterotroph, it obtains its energy by breaking down organic compounds, rather than producing its own food through photosynthesis or chemosynthesis. Pseudomonas fluorescens uses a variety of metabolic pathways to produce energy, including aerobic respiration, nitrate reduction, and glucose fermentation. The bacteria's cell wall is characterized by a gram-negative staining pattern, indicating the presence of a thin peptidoglycan layer and an outer membrane. Its rod-shaped morphology measures approximately 0.5-1.5 μm in length and 0.2-0.6 μm in width. Pseudomonas fluorescens is found in a wide range of environments, including soil, water, and the human body, where it can colonize various body sites such as the skin, respiratory tract, and gastrointestinal tract. The microbe is an obligate aerobe, requiring the presence of oxygen to survive and reproduce. One of the most notable features of Pseudomonas fluorescens is its ability to produce a greenish-blue pigment called pyoverdin, which is responsible for its fluorescent appearance under ultraviolet light. This pigment also plays a key role in the bacteria's ability to compete with other microorganisms for limited resources. Pseudomonas fluorescens is a model organism in scientific research due to its ability to degrade pollutants, produce antibiotics, and interact with plants and animals. Its genome has been fully sequenced, providing valuable insights into its metabolism, physiology, and adaptation to various environments. In summary, Pseudomonas fluorescens is a versatile and widely distributed microbe that thrives in diverse environments, using a variety of metabolic pathways to produce energy and interacting with its surroundings through the production of biomolecules such as pyoverdin. Its ability to adapt to different conditions, degrade pollutants, and produce antibiotics make it an important model organism for scientific research.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas fluorescens

Accession NumberNZ_CP012831.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5992 genes

Non-Coding Genes

206 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative cro/ci transcriptional regulatorBFW87_17390Not Available+3740822 - 374155627640.6
pyocin r2, holinBFW87_17395Not Available+3742155 - 374249912078.9
Hypothetical proteinBFW87_17400Not Available+3742521 - 374303618469.8
Putative baseplate assembly protein vBFW87_17405Not Available+3743040 - 374364821465.2
Putative baseplate assembly proteinBFW87_17410Not Available+3743661 - 374399312041.4
Baseplate assembly proteinBFW87_17415Not Available+3743990 - 374498536315.2
Phage tail protein iBFW87_17420Not Available+3744982 - 374561122319.5
Tail proteinBFW87_17425Not Available+3745612 - 374664036107.1
hypothetical proteinBFW87_17430Not Available+3747738 - 374837623594.6
Major tail sheath proteinBFW87_17435Not Available+3748636 - 374980241786.8

Displaying genes 1 – 10 of 45499 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0020176PE(14:1(9Z)/16:0)C35H68NO8PChemical structure of PE(14:1(9Z)/16:0)NULL
Average661.8901Da
Monoisotopic661.468254669Da
BASm0020207PS(12:0/16:0)C34H66NO10PChemical structure of PS(12:0/16:0)NULL
Average679.8623Da
Monoisotopic679.442433849Da
BASm0020208PS(12:0/16:1(9Z))C34H64NO10PChemical structure of PS(12:0/16:1(9Z))NULL
Average677.8464Da
Monoisotopic677.426783785Da
BASm0020209PS(14:1(9Z)/16:0)C36H68NO10PChemical structure of PS(14:1(9Z)/16:0)NULL
Average705.8996Da
Monoisotopic705.458083913Da
BASm0030785CDP-DG(12:0/18:1(11Z))C42H75N3O15P2Chemical structure of CDP-DG(12:0/18:1(11Z))NULL
Average924.016Da
Monoisotopic923.467342723Da
BASm0030809CDP-DG(14:0/18:1(11Z))C44H79N3O15P2Chemical structure of CDP-DG(14:0/18:1(11Z))NULL
Average952.07Da
Monoisotopic951.498642852Da
BASm0030858CDP-DG(14:1(9Z)/16:0)C42H75N3O15P2Chemical structure of CDP-DG(14:1(9Z)/16:0)NULL
Average924.016Da
Monoisotopic923.467342723Da
BASm0031891LPA(12:0/0:0)C15H31O7PChemical structure of LPA(12:0/0:0)NULL
Average354.38Da
Monoisotopic354.180740336Da
BASm0031892LPA(14:0/0:0)C17H35O7PChemical structure of LPA(14:0/0:0)NULL
Average382.434Da
Monoisotopic382.212040465Da
BASm0031894LPA(14:1(9Z)/0:0)C17H33O7PChemical structure of LPA(14:1(9Z)/0:0)NULL
Average380.418Da
Monoisotopic380.196390401Da

Displaying 71–80 of 88 metabolites