Pseudomonas fluorescens

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens is a gram-negative, rod-shaped bacterium that thrives in a wide range of environments with temperatures between 10°C and 40°C, classified as a thermotolerant microbe. As a chemoheterotroph, it obtains its energy by breaking down organic compounds, rather than producing its own food through photosynthesis or chemosynthesis. Pseudomonas fluorescens uses a variety of metabolic pathways to produce energy, including aerobic respiration, nitrate reduction, and glucose fermentation. The bacteria's cell wall is characterized by a gram-negative staining pattern, indicating the presence of a thin peptidoglycan layer and an outer membrane. Its rod-shaped morphology measures approximately 0.5-1.5 μm in length and 0.2-0.6 μm in width. Pseudomonas fluorescens is found in a wide range of environments, including soil, water, and the human body, where it can colonize various body sites such as the skin, respiratory tract, and gastrointestinal tract. The microbe is an obligate aerobe, requiring the presence of oxygen to survive and reproduce. One of the most notable features of Pseudomonas fluorescens is its ability to produce a greenish-blue pigment called pyoverdin, which is responsible for its fluorescent appearance under ultraviolet light. This pigment also plays a key role in the bacteria's ability to compete with other microorganisms for limited resources. Pseudomonas fluorescens is a model organism in scientific research due to its ability to degrade pollutants, produce antibiotics, and interact with plants and animals. Its genome has been fully sequenced, providing valuable insights into its metabolism, physiology, and adaptation to various environments. In summary, Pseudomonas fluorescens is a versatile and widely distributed microbe that thrives in diverse environments, using a variety of metabolic pathways to produce energy and interacting with its surroundings through the production of biomolecules such as pyoverdin. Its ability to adapt to different conditions, degrade pollutants, and produce antibiotics make it an important model organism for scientific research.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas fluorescens

Accession NumberNZ_CP012831.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5992 genes

Non-Coding Genes

206 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Bacteriophage tail tape measure proteinBFW87_17490Not Available+3756076 - 375726640510.2
Minor tail protein mBFW87_17495Not Available+3757294 - 375763212277.5
Minor tail proteinBFW87_17500Not Available+3757692 - 375837524909.3
Tail proteinBFW87_17505Not Available+3758378 - 375915128739.9
Tail assembly proteinBFW87_17510Not Available+3759185 - 375982322033.8
Putative tail component proteinBFW87_17515Not Available+3759857 - 376046521498.3
Tail tip fiber protein gp19BFW87_17520Not Available+3760526 - 3764242132669.0
hypothetical proteinBFW87_17525Not Available+3764242 - 376463114442.2
Hypothetical proteinBFW87_17530Not Available+3764632 - 376536026780.7
Baseplate wedge subunit and tail pin proteinBFW87_17535Not Available+3765579 - 376657735551.2

Displaying genes 21 – 30 of 45499 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da

Displaying 1–10 of 88 metabolites