Pseudomonas fluorescens

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens is a gram-negative, rod-shaped bacterium that thrives in a wide range of environments with temperatures between 10°C and 40°C, classified as a thermotolerant microbe. As a chemoheterotroph, it obtains its energy by breaking down organic compounds, rather than producing its own food through photosynthesis or chemosynthesis. Pseudomonas fluorescens uses a variety of metabolic pathways to produce energy, including aerobic respiration, nitrate reduction, and glucose fermentation. The bacteria's cell wall is characterized by a gram-negative staining pattern, indicating the presence of a thin peptidoglycan layer and an outer membrane. Its rod-shaped morphology measures approximately 0.5-1.5 μm in length and 0.2-0.6 μm in width. Pseudomonas fluorescens is found in a wide range of environments, including soil, water, and the human body, where it can colonize various body sites such as the skin, respiratory tract, and gastrointestinal tract. The microbe is an obligate aerobe, requiring the presence of oxygen to survive and reproduce. One of the most notable features of Pseudomonas fluorescens is its ability to produce a greenish-blue pigment called pyoverdin, which is responsible for its fluorescent appearance under ultraviolet light. This pigment also plays a key role in the bacteria's ability to compete with other microorganisms for limited resources. Pseudomonas fluorescens is a model organism in scientific research due to its ability to degrade pollutants, produce antibiotics, and interact with plants and animals. Its genome has been fully sequenced, providing valuable insights into its metabolism, physiology, and adaptation to various environments. In summary, Pseudomonas fluorescens is a versatile and widely distributed microbe that thrives in diverse environments, using a variety of metabolic pathways to produce energy and interacting with its surroundings through the production of biomolecules such as pyoverdin. Its ability to adapt to different conditions, degrade pollutants, and produce antibiotics make it an important model organism for scientific research.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas fluorescens

Accession NumberNZ_CP012831.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5992 genes

Non-Coding Genes

206 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative cro/ci transcriptional regulatorBFW87_17390Not Available+3740822 - 374155627640.6
pyocin r2, holinBFW87_17395Not Available+3742155 - 374249912078.9
Hypothetical proteinBFW87_17400Not Available+3742521 - 374303618469.8
Putative baseplate assembly protein vBFW87_17405Not Available+3743040 - 374364821465.2
Putative baseplate assembly proteinBFW87_17410Not Available+3743661 - 374399312041.4
Baseplate assembly proteinBFW87_17415Not Available+3743990 - 374498536315.2
Phage tail protein iBFW87_17420Not Available+3744982 - 374561122319.5
Tail proteinBFW87_17425Not Available+3745612 - 374664036107.1
hypothetical proteinBFW87_17430Not Available+3747738 - 374837623594.6
Major tail sheath proteinBFW87_17435Not Available+3748636 - 374980241786.8

Displaying genes 1 – 10 of 45499 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0017691PS(14:0/18:1(11Z))C38H72NO10PChemical structure of PS(14:0/18:1(11Z))NULL
Average733.965Da
Monoisotopic733.48938452Da
BASm0017737PG(14:1(7Z)/14:1(7Z))C34H63O10PChemical structure of PG(14:1(7Z)/14:1(7Z))NULL
Average662.842Da
Monoisotopic662.415885227Da
BASm0017743Stearoyl-CoAC39H70N7O17P3SChemical structure of Stearoyl-CoA362-66-3
Average1033.996Da
Monoisotopic1033.376174075Da
BASm0017775PE(12:0/14:0)C31H62NO8PChemical structure of PE(12:0/14:0)NULL
Average607.81Da
Monoisotopic607.421304958Da
BASm0017777PE(12:0/16:0)C33H66NO8PChemical structure of PE(12:0/16:0)NULL
Average635.864Da
Monoisotopic635.452605087Da
BASm0017778PE(12:0/16:1(9Z))C33H64NO8PChemical structure of PE(12:0/16:1(9Z))NULL
Average633.848Da
Monoisotopic633.436955023Da
BASm0017781PE(12:0/18:1(11Z))C35H68NO8PChemical structure of PE(12:0/18:1(11Z))NULL
Average661.902Da
Monoisotopic661.468255152Da
BASm0018523CDP-DG(12:0/14:0)C38H69N3O15P2Chemical structure of CDP-DG(12:0/14:0)NULL
Average869.924Da
Monoisotopic869.42039253Da
BASm0018525CDP-DG(12:0/16:0)C40H73N3O15P2Chemical structure of CDP-DG(12:0/16:0)NULL
Average897.978Da
Monoisotopic897.451692659Da
BASm0018526CDP-DG(12:0/16:1(9Z))C40H71N3O15P2Chemical structure of CDP-DG(12:0/16:1(9Z))NULL
Average895.962Da
Monoisotopic895.436042594Da

Displaying 21–30 of 88 metabolites