Brevundimonas diminuta str. ATCC (B)19146 (B)19146

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Brevundimonas

Description

Brevundimonas diminuta str. ATCC (B)19146 is a Gram-negative, strictly anaerobic bacterium characterized by its ability to thrive in environments devoid of oxygen. This strain is part of the broader Brevundimonas genus, which is known for its diverse metabolic capabilities and adaptability to various ecological niches. As a member of the Bacteroidetes phylum, B. diminuta demonstrates a unique cellular structure typical of Gram-negative bacteria, including a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides. The anaerobic nature of B. diminuta suggests that it has evolved mechanisms to utilize alternative electron acceptors for energy production, which may be crucial for its survival in anoxic environments. This trait positions the organism as a potential player in biogeochemical cycles, particularly in anaerobic ecosystems where organic matter decomposition occurs. Studies on Brevundimonas diminuta have highlighted its capacity to degrade various organic compounds, which may contribute to nutrient recycling in sedimentary environments. This metabolic versatility emphasizes the ecological importance of B. diminuta, as it aids in the breakdown of complex organic materials, thereby influencing microbial community dynamics and nutrient availability in anaerobic habitats. Understanding the specific metabolic pathways utilized by this strain could provide insights into its role in both natural and engineered anaerobic processes, such as bioremediation and wastewater treatment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusBrevundimonas
SpeciesBrevundimonas diminuta
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Brevundimonas diminuta str. ATCC (B)19146 (B)19146

Accession NumberNZ_CP035093.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3402 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf4232 domain-containing proteinEQG53_RS15355Not Available-3111615 - 311250530061.4
tonb-dependent receptor domain-containing proteinEQG53_RS15360Not Available+3112648 - 311476575723.4
tonb-dependent receptorEQG53_RS15365Not Available+3115112 - 311786298019.6
methylmalonyl-coa epimeraseEQG53_RS15370Not Available-3118074 - 311849614901.2
methylmalonyl-coa mutaseEQG53_RS15375Not Available-3118493 - 312065276988.0
methylmalonyl-coa mutase family proteinEQG53_RS15380Not Available-3120649 - 312202547560.3
acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alphaEQG53_RS15385Not Available-3122026 - 312400271595.2
acyl-coa carboxylase subunit betaEQG53_RS15390Not Available-3124012 - 312554755393.4
short-chain fatty acyl-coa regulator family proteinEQG53_RS15395Not Available+3125693 - 312710552380.4
coa-acylating methylmalonate-semialdehyde dehydrogenaseEQG53_RS15400Not Available-3127306 - 312880854147.7

Displaying genes 3121 – 3130 of 3526 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da

Displaying 1–10 of 88 metabolites