Thermus aquaticus str. YT-1

RodNon-motile

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Thermales

Family

Thermaceae

Genus

Thermus

Description

Thermus aquaticus str. YT-1 is a nonsporulating, rod-shaped bacterium that thrives in high-temperature environments, with an optimal growth temperature of 75.0°C. This thermophilic organism is classified as a chemoheterotroph, indicating that it derives its energy from organic compounds rather than through photosynthesis or inorganic sources. Isolated from a hot spring habitat, T. aquaticus str. YT-1 has adapted to extreme thermal conditions that are inhospitable to many other microbial life forms. Its ability to metabolize a variety of organic substrates in such environments highlights its ecological role in nutrient cycling within geothermal ecosystems. The unique adaptations of T. aquaticus str. YT-1 make it a valuable subject of study, particularly in the context of biotechnological applications, such as the development of heat-stable enzymes for industrial processes. Furthermore, the bacterium's habitat in hot springs suggests it may contribute to the overall microbial diversity and functional dynamics of these high-temperature ecosystems, playing a crucial role in maintaining the biochemical balance in such extreme environments.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderThermales
FamilyThermaceae
GenusThermus
SpeciesThermus aquaticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Thermus aquaticus str. YT-1
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature75
Temperature rangeThermophilic
HabitatHot spring
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Thermus aquaticus str. YT-1

Accession NumberLHCI00000000.1

Gene Summary

Adenine Count

351593 bp

Thymine Count

355228 bp

Guanine Count

758389 bp

Cytosine Count

750983 bp

Genome Length

2248795 bp

Protein-coding Genes

2348 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ribosomal protein s12 methylthiotransferase rimoBVI061214_01594Q72JG1+1444379 - 144568348156.4
trk system potassium uptake protein trkaBVI061214_01595O29420+1445696 - 144703348866.3
trk system potassium uptake protein trkgBVI061214_01596P23849+1447005 - 144847753243.1
glycogen phosphorylaseBVI061214_01597Q9YGA7+1448598 - 145105491339.1
cystine-binding periplasmic protein precursorBVI061214_01598Q46125+1451165 - 145192928182.3
glutamine transport system permease protein glnpBVI061214_01599P0AEQ8+1451979 - 145277028708.9
nmt1/thi5 like proteinBVI061214_01600P0A3T3+1452828 - 145377833680.2
sialic acid trap transporter permease protein siatBVI061214_01601Not Available+1453835 - 145580870007.7
glutamine transport atp-binding protein glnqBVI061214_01602P27675+1455815 - 145654927517.7
hypothetical proteinBVI061214_01603Not Available+1456552 - 145695914215.2

Displaying genes 1591 – 1600 of 2409 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

169 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000590phloretateC9H9O3Chemical structure of phloretateNot available
Average165.169Da
Monoisotopic165.05571773Da

Displaying 1–10 of 169 metabolites