Helicobacter cinaedi

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter cinaedi is a microbe that thrives in mesophilic environments, meaning it has a temperature preference category of 20-45°C. As a chemoheterotroph, it obtains its energy by breaking down organic compounds, typically in the form of carbohydrates or proteins. H. cinaedi produces energy through the process of fermentation, a metabolic pathway that converts glucose into lactic acid. Its Gram stain classification is negative, which means it does not retain the crystal violet stain used in the Gram staining technique, resulting in a pink color. The microbe has a helical shape, characteristic of the genus Helicobacter, which is typically composed of spiral-shaped bacteria. H. cinaedi can be found in a variety of body sites, including the respiratory, gastrointestinal, and genitourinary tracts, as well as skin and soft tissue. Its ability to colonize multiple sites is likely due to its ability to adapt to different environments and exploit available nutrient sources. Oxygen preference for H. cinaedi is facultative anaerobic, meaning it can grow in the presence of oxygen but can also survive and thrive in low-oxygen environments. While H. cinaedi is not typically considered a major pathogen, it can cause disease in immunocompromised individuals, such as those with HIV/AIDS or undergoing chemotherapy. In these cases, the microbe can cause a range of symptoms, from mild skin lesions to severe systemic infections. Despite its relatively innocuous nature, H. cinaedi is an important member of the human microbiome, playing a role in maintaining the balance of the intestinal ecosystem. Its ability to colonize multiple sites and adapt to changing environments makes it a resilient and fascinating microbe.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter cinaedi
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter cinaedi
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestinal resident; wastewater treatment plants
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter cinaedi

Accession NumberUGHX00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1809 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative portal proteinNCTC12219_01876Not Available+1877475 - 187775311065.5
Putative portal proteinNCTC12219_01877Not Available+1877770 - 18779045009.91
Putative portal proteinNCTC12219_01878Not Available+1877905 - 18781418725.67
AttlNot AvailableNot Available+1879037 - 1879116Not Available
uncharacterised proteinNCTC12219_01879Not Available+1879153 - 18793507728.92
Hypothetical proteinNCTC12219_01880Not Available+1879571 - 188006518906.7
uncharacterised proteinNCTC12219_01881Not Available+1880067 - 18802075345.2
Hypothetical proteinNCTC12219_01882Not Available+1880250 - 188116134247.6
uncharacterised proteinNCTC12219_01883Not Available+1881636 - 188313556255.7
uncharacterised proteinNCTC12219_01884Not Available-1883450 - 18836869205.23

Displaying genes 41 – 50 of 1902 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017265Uridine diphosphate-N-acetylglucosamineC17H27N3O17P2Chemical structure of Uridine diphosphate-N-acetylglucosamine528-04-1
Average607.3537Da
Monoisotopic607.081569477Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da
BASm0017409PA(16:0/18:1(9Z))C37H71O8PChemical structure of PA(16:0/18:1(9Z))NULL
Average674.941Da
Monoisotopic674.488656244Da
BASm0017415PA(18:1(9Z)/18:1(9Z))C39H73O8PChemical structure of PA(18:1(9Z)/18:1(9Z))14268-17-8
Average700.979Da
Monoisotopic700.504306309Da
BASm0017417PE(14:0/16:0)C35H70NO8PChemical structure of PE(14:0/16:0)NULL
Average663.918Da
Monoisotopic663.483905216Da
BASm0017419PE(14:0/18:1(11Z))C37H72NO8PChemical structure of PE(14:0/18:1(11Z))NULL
Average689.956Da
Monoisotopic689.49955528Da
BASm0017461PS(14:0/16:0)C36H70NO10PChemical structure of PS(14:0/16:0)NULL
Average707.927Da
Monoisotopic707.473734456Da
BASm0017610N-Acetylmuramate 6-phosphateC11H19NO11PChemical structure of N-Acetylmuramate 6-phosphateNULL
Average372.2424Da
Monoisotopic372.069571967Da

Displaying 11–20 of 88 metabolites