Helicobacter pylori str. ZH93

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain ZH93 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and single-cell arrangement. This strain thrives optimally at a temperature of 37.0°C, which aligns well with its habitat as it is closely associated with the host, typically residing within the gastric mucosa of humans and other mammals. The microaerophilic nature of H. pylori ZH93 indicates a requirement for low levels of oxygen, which is consistent with the oxygen-limited conditions of the stomach environment. This adaptation allows the microbe to maintain its viability and metabolic functions in a habitat where higher oxygen levels would be detrimental. Given its host-associated habitat, H. pylori ZH93 likely plays a significant role in the complex interactions within the gastric microbiome, including potential influences on host immune responses and nutrient absorption. Further studies could elucidate the specific ecological niches it occupies and its interactions with both the host and other microbial communities in the gastrointestinal tract. Understanding these dynamics may provide insights into the broader implications of H. pylori in human health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori str. ZH93

Accession NumberRJHG00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1439 genes

Non-Coding Genes

37 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
site-specific dna-methyltransferaseEC543_00380Not Available+79992 - 8069027080.9
agmatine deiminaseEC543_00385Not Available+80742 - 8173437520.2
carbamoyltransferase hypfEC543_00390Not Available+81674 - 8398387232.4
hydrogenase expression/formation protein hypeEC543_00395Not Available+84004 - 8500236387.5
hypothetical proteinEC543_00400Not Available+85165 - 8545811338.5
gdp-l-fucose synthaseEC543_00405Not Available-85859 - 8679134904.6
gdp-mannose 4,6-dehydrataseEC543_00410Not Available-86784 - 8792943828.4
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomeraseEC543_00415Not Available-87971 - 8938353403.0
trbi/virb10 family proteinEC543_00420Not Available-89453 - 9058341961.8
conjugal transfer proteinEC543_00425Not Available-90576 - 9155937764.5

Displaying genes 71 – 80 of 1476 in total

Pathways

26 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites