Helicobacter pylori str. ZH42

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ZH42 is a Gram-negative, microaerophilic bacterium characterized by its spiral shape and occurrence as single cells. This strain thrives at an optimal temperature of 37.0°C, indicating its adaptation to the human body, where it is commonly found in association with gastric tissues. As a member of the Helicobacter genus, H. pylori str. ZH42 occupies a unique ecological niche within the host's gastric environment, where it interacts with the gastric mucosa and may influence local microbiota dynamics. The microaerophilic nature of this strain suggests that it requires reduced oxygen levels for optimal growth, which aligns with its habitat in the stomach, where oxygen concentration is lower than in the external environment. The unique traits of H. pylori str. ZH42 not only facilitate its survival in the harsh gastric environment but may also play a role in the broader ecological interactions within the host's gastrointestinal microbiome. Understanding its specific adaptations and interactions could provide insights into the complex relationships between host and microbe in health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori str. ZH42

Accession NumberRJFP00000000.1

Gene Summary

Adenine Count

498959 bp

Thymine Count

495966 bp

Guanine Count

319966 bp

Cytosine Count

317716 bp

Genome Length

1644695 bp

Protein-coding Genes

1570 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
abc transporter atp-binding proteinECC40_02790Not Available-542845 - 54351625372.8
trna (guanosine(46)-n7)-methyltransferase trmbECC40_02795Not Available-543513 - 54469445677.8
fibronectin type iii domain-containing proteinECC40_02800Not Available-544705 - 54596448080.1
rlua family pseudouridine synthaseECC40_02805Not Available-545915 - 54689837767.6
hypothetical proteinECC40_02815Not Available+547427 - 54824529641.4
rod shape-determining protein rodaECC40_02820Not Available+548268 - 54941343108.5
Trna-metNot AvailableNot Available+549375 - 549451Not Available
ribose-phosphate pyrophosphokinaseECC40_02830Not Available-549479 - 55043534807.6
hit domain-containing proteinECC40_02835Not Available-550500 - 55098518394.4
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseECC40_02840Not Available-550995 - 55247656032.1

Displaying genes 541 – 550 of 1611 in total

Pathways

26 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites