Helicobacter pylori str. ZH39

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ZH39 is a Gram-negative bacterium characterized by its spiral shape and solitary cell arrangement. This microbe thrives optimally at a temperature of 37.0°C and exhibits a microaerophilic oxygen requirement, indicating its adaptation to environments with reduced oxygen concentrations, such as the gastric mucosa of its host. H. pylori is well-known for its association with the human gastric environment, where it establishes a niche that allows it to persist despite the harsh acidic conditions. The microbe's spiral morphology is thought to enhance its motility, facilitating penetration into the protective mucous layer of the stomach lining. The habitat of H. pylori str. ZH39 is primarily host-associated, reinforcing its symbiotic relationship with humans and potentially influencing the host's gastric health. This strain, like other H. pylori strains, may contribute to the complex dynamics of the gastric microbiome, suggesting that its presence could play a role in modulating local immune responses or influencing the overall microbial composition in the stomach. Overall, the unique adaptations of H. pylori str. ZH39 to its microaerophilic environment and its ability to thrive at physiological temperatures highlight its evolutionary success as a resident of the human gastrointestinal tract.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori str. ZH39

Accession NumberRJFM00000000.1

Gene Summary

Adenine Count

496405 bp

Thymine Count

501991 bp

Guanine Count

315821 bp

Cytosine Count

318927 bp

Genome Length

1635446 bp

Protein-coding Genes

1452 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
m23 family peptidaseECC37_03600Not Available-734074 - 73527646023.0
abc transporter permeaseECC37_03605Not Available-735269 - 73607530851.6
abc transporter atp-binding proteinECC37_03610Not Available-736062 - 73673325405.8
trna (guanosine(46)-n7)-methyltransferase trmbECC37_03615Not Available-736730 - 73791145610.6
fibronectin type iii domain-containing proteinECC37_03620Not Available-737921 - 73918048147.2
rlua family pseudouridine synthaseECC37_03625Not Available-739131 - 74011437811.4
gtpaseECC37_03630Not Available+740248 - 74067616125.1
duf697 domain-containing proteinECC37_03635Not Available+740697 - 74144026585.5
rod shape-determining protein rodaECC37_03640Not Available+741457 - 74260243094.5
Trna-metNot AvailableNot Available+742564 - 742640Not Available

Displaying genes 701 – 710 of 1516 in total

Pathways

26 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites