Helicobacter pylori str. ZH109

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ZH109 is a Gram-negative bacterium characterized by its spirilla shape and solitary cell arrangement. This microbe thrives optimally at 37.0°C, which aligns with the average human body temperature, indicating its adaptation to a host-associated habitat. H. pylori str. ZH109 exhibits microaerophilic oxygen requirements, suggesting that it prefers environments with reduced oxygen levels, a trait that is consistent with its colonization of the gastric mucosa where oxygen concentration is lower than in the external environment. As a member of the Helicobacter genus, this strain is known for its unique physiology that allows it to navigate the acidic conditions of the stomach. The presence of this bacterium in the host can lead to various interactions with the gastric microenvironment, influencing local pH and potentially interacting with the host's immune responses. The ecological role of H. pylori str. ZH109 may extend beyond mere survival, potentially participating in the complex microbial dynamics of the gastrointestinal tract. Understanding the specific traits of this strain can provide insights into its ecological niche and its interactions within the host, contributing to the broader understanding of microbial communities in health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori str. ZH109

Accession NumberRJHV00000000.1

Gene Summary

Adenine Count

486229 bp

Thymine Count

481045 bp

Guanine Count

312771 bp

Cytosine Count

305680 bp

Genome Length

1590121 bp

Protein-coding Genes

1455 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
is701 family transposaseEC561_03830Not Available+759246 - 76053549305.8
outer membrane beta-barrel protein hofeEC561_03835Not Available+760628 - 76199551847.5
hypothetical proteinEC561_03840Not Available-762002 - 76252920013.9
Tmrna,resume consensus sequence (at 77): aataactgtaaacaacacNot AvailableNot Available+762572 - 762957Not Available
outer membrane lipoprotein chaperone lolaEC561_03850Not Available-763022 - 76357621440.2
preprotein translocase subunit secaEC561_03855Not Available+763724 - 76632199093.0
abc transporter permeaseEC561_03860Not Available+766311 - 76754346015.1
outer membrane beta-barrel protein hoffEC561_03865Not Available+767824 - 76932356843.1
fad-dependent thymidylate synthaseEC561_03870Not Available-769944 - 77057024024.8
glutamine--fructose-6-phosphate transaminase (isomerizing)EC561_03875Not Available-770592 - 77238567128.9

Displaying genes 731 – 740 of 1497 in total

Pathways

26 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites