Helicobacter pylori str. UM163R

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. UM163R is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and arrangement as single cells. This strain thrives optimally at a temperature of 37.0°C, suggesting a close association with warm-blooded hosts, where it is typically found in the gastric environment. H. pylori is known for its ability to colonize the acidic conditions of the stomach, which may be facilitated by its unique morphological and physiological traits, including its spiral shape that aids in motility and colonization. The microaerophilic nature of H. pylori str. UM163R indicates that it requires reduced oxygen levels for optimal growth, which is consistent with its habitat in the gastric mucosa where oxygen concentrations are lower than in the atmosphere. This adaptation allows it to persist in a niche that is inhospitable to many other microorganisms. The strain's association with a host underscores its potential role in the complex microbial dynamics of the gastrointestinal tract. Given its specific growth conditions and habitat, H. pylori str. UM163R may contribute to the intricate balance of microbial communities within the stomach, potentially influencing the host's health through interactions with other microbial species and the host immune response. Understanding these ecological relationships can provide insights into the broader implications of H. pylori in gastrointestinal health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori str. UM163R

Accession NumberLLVX00000000.2

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1470 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Trna-serNot AvailableNot Available+288518 - 288605Not Available
hypothetical proteinAP069_0201425Not Available-288652 - 28905915431.7
prokaryotic metallothionein family proteinAP069_0201430Not Available-289062 - 2893049218.35
16s rrna (guanine(527)-n(7))-methyltransferase rsmgAP069_0201435Not Available-289298 - 28983420521.2
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaAP069_0201440Not Available-289831 - 29086839900.5
twin arginine-targeting protein translocase tatcAP069_0201445Not Available-290869 - 29163028160.9
twin arginine-targeting protein translocase tatbAP069_0201450Not Available-291623 - 29210518371.7
holliday junction dna helicase ruvbAP069_0201455Not Available-292173 - 29318337269.4
3-methyl-2-oxobutanoate hydroxymethyltransferaseAP069_0201460Not Available-293184 - 29399629823.4
hypothetical proteinAP069_0201465Not Available+294146 - 29486827335.3

Displaying genes 281 – 290 of 1512 in total

Pathways

26 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites