Helicobacter pylori str. UM163R

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. UM163R is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and arrangement as single cells. This strain thrives optimally at a temperature of 37.0°C, suggesting a close association with warm-blooded hosts, where it is typically found in the gastric environment. H. pylori is known for its ability to colonize the acidic conditions of the stomach, which may be facilitated by its unique morphological and physiological traits, including its spiral shape that aids in motility and colonization. The microaerophilic nature of H. pylori str. UM163R indicates that it requires reduced oxygen levels for optimal growth, which is consistent with its habitat in the gastric mucosa where oxygen concentrations are lower than in the atmosphere. This adaptation allows it to persist in a niche that is inhospitable to many other microorganisms. The strain's association with a host underscores its potential role in the complex microbial dynamics of the gastrointestinal tract. Given its specific growth conditions and habitat, H. pylori str. UM163R may contribute to the intricate balance of microbial communities within the stomach, potentially influencing the host's health through interactions with other microbial species and the host immune response. Understanding these ecological relationships can provide insights into the broader implications of H. pylori in gastrointestinal health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori str. UM163R

Accession NumberLLVX00000000.2

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1470 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
indole-3-glycerol phosphate synthaseAP069_0200910Not Available+179459 - 18001921209.0
ferredoxinAP069_0200915Not Available+180076 - 1803309514.82
guanosine polyphosphate pyrophosphohydrolaseAP069_0200920Not Available+180340 - 18179454487.6
lipopolysaccharide heptosyltransferase iAP069_0200925Not Available+181791 - 18280138220.1
lipid a biosynthesis lauroyl acyltransferaseAP069_0200930Not Available+182798 - 18378438509.5
trna guanosine(34) transglycosylase tgtAP069_0200935Not Available-183816 - 18493141477.0
potassium transporter trkaAP069_0200940Not Available+184988 - 18642455787.9
3-dehydroquinate synthaseAP069_0200945Not Available+186431 - 18746238850.7
hypothetical proteinAP069_0200950Not Available+187453 - 18902460120.5
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabAP069_0200955Not Available+189021 - 19027747877.8

Displaying genes 181 – 190 of 1512 in total

Pathways

26 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites