Helicobacter pylori str. UM163R

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. UM163R is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and arrangement as single cells. This strain thrives optimally at a temperature of 37.0°C, suggesting a close association with warm-blooded hosts, where it is typically found in the gastric environment. H. pylori is known for its ability to colonize the acidic conditions of the stomach, which may be facilitated by its unique morphological and physiological traits, including its spiral shape that aids in motility and colonization. The microaerophilic nature of H. pylori str. UM163R indicates that it requires reduced oxygen levels for optimal growth, which is consistent with its habitat in the gastric mucosa where oxygen concentrations are lower than in the atmosphere. This adaptation allows it to persist in a niche that is inhospitable to many other microorganisms. The strain's association with a host underscores its potential role in the complex microbial dynamics of the gastrointestinal tract. Given its specific growth conditions and habitat, H. pylori str. UM163R may contribute to the intricate balance of microbial communities within the stomach, potentially influencing the host's health through interactions with other microbial species and the host immune response. Understanding these ecological relationships can provide insights into the broader implications of H. pylori in gastrointestinal health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori str. UM163R

Accession NumberLLVX00000000.2

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1470 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
lipopolysaccharide 1,2-glucosyltransferaseAP069_0200555Not Available-108943 - 1090564242.14
hypothetical proteinAP069_0200560Not Available+109211 - 11056352479.3
molecular chaperone htpgAP069_0200565Not Available+110666 - 11253171360.2
sel1 repeat protein hcpaAP069_0200570Not Available-112714 - 11346627328.8
succinyl-diaminopimelate desuccinylaseAP069_0200575Not Available-113922 - 11505841606.5
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgAP069_0200580Not Available-115069 - 11693469741.1
carboxylate transporterAP069_0200585Not Available+117030 - 11868859996.4
phosphatidate cytidylyltransferaseAP069_0200590Not Available+118701 - 11950128905.1
1-deoxy-d-xylulose-5-phosphate reductoisomeraseAP069_0200595Not Available+119502 - 12060840226.5
beta-1,4-n-acetylgalactosaminyltransferaseAP069_0200600Not Available+120659 - 12095811491.8

Displaying genes 111 – 120 of 1512 in total

Pathways

26 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites