Helicobacter pylori str. UM045

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain UM045 is a Gram-negative, microaerophilic bacterium characterized by its spiral shape and singular cell arrangement. This organism thrives optimally at a temperature of 37.0°C, which aligns with its adaptation to a host-associated habitat, typically residing in the gastric mucosa of mammals. The microaerophilic nature of H. pylori str. UM045 indicates that it requires lower levels of oxygen for growth than are present in the atmosphere, which is a characteristic feature of many gastric pathogens. The spiral morphology of this strain may facilitate motility within the viscous gastric environment, allowing it to colonize the stomach lining and evade the host's immune responses. Further investigation into H. pylori str. UM045 could provide insights into its interactions with the gastric microbiome, potentially influencing gastric health and disease states in its host. Its adaptation to a microaerophilic lifestyle suggests a specialized niche within the host's gastrointestinal tract, where it may play a role in the local microbial community dynamics. Understanding these interactions may contribute to broader ecological perspectives on host-microbe relationships in the gastrointestinal environment.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori str. UM045

Accession NumberLELJ00000000.1

Gene Summary

Adenine Count

488109 bp

Thymine Count

489044 bp

Guanine Count

309169 bp

Cytosine Count

315546 bp

Genome Length

1601999 bp

Protein-coding Genes

1409759 genes

Non-Coding Genes

192240 genes

# of Chromosomes/Plasmids

1

Genes

No genes available for this genome.

Pathways

26 pathways

Metabolites

404 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001492(2Z,4E)-2-hydroxyhexa-2,4-dienedioateC6H4O5Chemical structure of (2Z,4E)-2-hydroxyhexa-2,4-dienedioateNot available
Average156.094Da
Monoisotopic156.006970389Da
BASm0001514Fe(III)-enterobactinC30H21FeN3O15Chemical structure of Fe(III)-enterobactinNot available
Average719.344Da
Monoisotopic719.0322092Da
BASm00016432,5-dichlorocyclohexa-2,5-dien-1,4-diolC6H6Cl2O2Chemical structure of 2,5-dichlorocyclohexa-2,5-dien-1,4-diolNot available
Average181.01Da
Monoisotopic179.9744848Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001758(9Z,12Z)-octadecadienoateC18H31O2Chemical structure of (9Z,12Z)-octadecadienoateNot available
Average279.445Da
Monoisotopic279.2329538Da
BASm0001767oxalateC2O4Chemical structure of oxalateNot available
Average88.019Da
Monoisotopic87.979658488Da
BASm0001772maleateC4H2O4Chemical structure of maleateNot available
Average114.057Da
Monoisotopic113.996405704Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da

Displaying 51–60 of 404 metabolites