Helicobacter pylori str. UM045

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain UM045 is a Gram-negative, microaerophilic bacterium characterized by its spiral shape and singular cell arrangement. This organism thrives optimally at a temperature of 37.0°C, which aligns with its adaptation to a host-associated habitat, typically residing in the gastric mucosa of mammals. The microaerophilic nature of H. pylori str. UM045 indicates that it requires lower levels of oxygen for growth than are present in the atmosphere, which is a characteristic feature of many gastric pathogens. The spiral morphology of this strain may facilitate motility within the viscous gastric environment, allowing it to colonize the stomach lining and evade the host's immune responses. Further investigation into H. pylori str. UM045 could provide insights into its interactions with the gastric microbiome, potentially influencing gastric health and disease states in its host. Its adaptation to a microaerophilic lifestyle suggests a specialized niche within the host's gastrointestinal tract, where it may play a role in the local microbial community dynamics. Understanding these interactions may contribute to broader ecological perspectives on host-microbe relationships in the gastrointestinal environment.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori str. UM045

Accession NumberLELJ00000000.1

Gene Summary

Adenine Count

488109 bp

Thymine Count

489044 bp

Guanine Count

309169 bp

Cytosine Count

315546 bp

Genome Length

1601999 bp

Protein-coding Genes

1409759 genes

Non-Coding Genes

192240 genes

# of Chromosomes/Plasmids

1

Genes

No genes available for this genome.

Pathways

26 pathways

Metabolites

404 records
Metabolite IDMetabolite nameStructureCAS number
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002319Cu(+)CuChemical structure of Cu(+)7440-50-8
Average63.546Da
Monoisotopic62.92960108Da
BASm00023793-hydroxyaminophenolC6H7NO2Chemical structure of 3-hydroxyaminophenolNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0002411(S)-benzoinC14H12O2Chemical structure of (S)-benzoinNot available
Average212.248Da
Monoisotopic212.083729626Da
BASm0002530(E)-cinnamoyl-CoAC30H42N7O17P3SChemical structure of (E)-cinnamoyl-CoANot available
Average897.68Da
Monoisotopic897.1570751Da
BASm00025382-(5-oxo-2,5-dihydrofuran-2-ylidene)acetateC6H3O4Chemical structure of 2-(5-oxo-2,5-dihydrofuran-2-ylidene)acetateNot available
Average139.087Da
Monoisotopic139.0036822Da
BASm0002546(indol-3-yl)acetyl-CoAC31H39N8O17P3SChemical structure of (indol-3-yl)acetyl-CoANot available
Average920.68Da
Monoisotopic920.1388683Da
BASm00025603-oxopristanoyl-CoAC40H66N7O18P3SChemical structure of 3-oxopristanoyl-CoANot available
Average1057.98Da
Monoisotopic1057.341985Da
BASm0002584(S)-malyl-CoAC25H35N7O20P3SChemical structure of (S)-malyl-CoANot available
Average878.57Da
Monoisotopic878.0897866Da
BASm0002593(2E)-dodecenoyl-CoAC33H52N7O17P3SChemical structure of (2E)-dodecenoyl-CoA1066-12-2
Average943.789Da
Monoisotopic943.2353235Da

Displaying 91–100 of 404 metabolites