Helicobacter pylori str. ATCC 43504

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ATCC 43504 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and single-cell arrangement. This strain thrives optimally at a temperature of 37.0°C, which corresponds with the average human body temperature, underscoring its adaptation to a host-associated habitat. H. pylori is well-known for its colonization of the gastric epithelium in humans, where it can survive in the acidic environment of the stomach. The microaerophilic requirement indicates that this organism prefers low oxygen concentrations, which is typical of its ecological niche within the gastric mucus layer. This adaptation allows H. pylori to effectively evade the host's immune response and persist in the hostile gastric environment. The ability of H. pylori to maintain its structural integrity and metabolic functions under these conditions reflects its evolutionary specialization for survival in a unique ecological niche. This specialization may contribute to its role in various gastric conditions, although the specific pathogenic mechanisms and implications for human health associated with this strain are not detailed here. Understanding the physiological traits of H. pylori str. ATCC 43504 helps provide insights into its ecological dynamics and interactions within the human host.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori str. ATCC 43504

Accession NumberNZ_AP017633.1

Gene Summary

Adenine Count

488615 bp

Thymine Count

488780 bp

Guanine Count

310830 bp

Cytosine Count

314868 bp

Genome Length

1603093 bp

Protein-coding Genes

1494 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
outer membrane beta-barrel protein hofgHPPMSS1_RS03990Not Available-852216 - 85376058879.7
tonb-dependent receptor domain-containing proteinHPPMSS1_RS03995Not Available-854006 - 85644190508.0
sua5 ycio yrdc ywlc family proteinHPPMSS1_RS04000Not Available-856625 - 85705616178.7
carbamoyl-phosphate synthase large subunitHPPMSS1_RS04005Not Available-857061 - 860318120131.0
bax inhibitor-1/ycca family proteinHPPMSS1_RS04010Not Available-860417 - 86110925190.6
type i glyceraldehyde-3-phosphate dehydrogenaseHPPMSS1_RS04015Not Available+861253 - 86225137414.6
vacuolating cytotoxin domain-containing proteinHPPMSS1_RS04020Not Available+862332 - 869567260775.0
hop family outer membrane protein hopj/hopkHPPMSS1_RS04025Not Available+869619 - 87071941492.3
2-hydroxymuconate tautomerase family proteinHPPMSS1_RS04030Not Available-870786 - 8709927512.07
recombination mediator recrHPPMSS1_RS04035Not Available+871154 - 87173522009.4

Displaying genes 811 – 820 of 1542 in total

Pathways

26 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites