Helicobacter pylori str. ATCC 43504

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ATCC 43504 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and single-cell arrangement. This strain thrives optimally at a temperature of 37.0°C, which corresponds with the average human body temperature, underscoring its adaptation to a host-associated habitat. H. pylori is well-known for its colonization of the gastric epithelium in humans, where it can survive in the acidic environment of the stomach. The microaerophilic requirement indicates that this organism prefers low oxygen concentrations, which is typical of its ecological niche within the gastric mucus layer. This adaptation allows H. pylori to effectively evade the host's immune response and persist in the hostile gastric environment. The ability of H. pylori to maintain its structural integrity and metabolic functions under these conditions reflects its evolutionary specialization for survival in a unique ecological niche. This specialization may contribute to its role in various gastric conditions, although the specific pathogenic mechanisms and implications for human health associated with this strain are not detailed here. Understanding the physiological traits of H. pylori str. ATCC 43504 helps provide insights into its ecological dynamics and interactions within the human host.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori str. ATCC 43504

Accession NumberNZ_AP017633.1

Gene Summary

Adenine Count

488615 bp

Thymine Count

488780 bp

Guanine Count

310830 bp

Cytosine Count

314868 bp

Genome Length

1603093 bp

Protein-coding Genes

1494 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
methylated-dna--[protein]-cysteine s-methyltransferaseHPPMSS1_RS02870Not Available+599744 - 60025019087.1
tyrosine recombinase xerhHPPMSS1_RS02875Not Available-600313 - 60138341260.4
hypothetical proteinHPPMSS1_RS02880Not Available-601554 - 60265742132.4
pyridoxal phosphate-dependent aminotransferaseHPPMSS1_RS02885Not Available-602802 - 60397442783.9
outer membrane proteinHPPMSS1_RS02890Not Available-604134 - 60494630349.1
hypothetical proteinHPPMSS1_RS07910Not Available-605000 - 6051887348.37
type i restriction-modification system subunit mHPPMSS1_RS02895Not Available-605189 - 609939173761.0
(fe-s)-binding proteinHPPMSS1_RS02900Not Available-610017 - 61131849146.1
oxygen-independent coproporphyrinogen iii oxidaseHPPMSS1_RS02905Not Available-611315 - 61268853302.0
duf2603 domain-containing proteinHPPMSS1_RS02910Not Available-612688 - 61320320110.9

Displaying genes 581 – 590 of 1542 in total

Pathways

26 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites