Helicobacter pylori str. ATCC 43504

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ATCC 43504 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and single-cell arrangement. This strain thrives optimally at a temperature of 37.0°C, which corresponds with the average human body temperature, underscoring its adaptation to a host-associated habitat. H. pylori is well-known for its colonization of the gastric epithelium in humans, where it can survive in the acidic environment of the stomach. The microaerophilic requirement indicates that this organism prefers low oxygen concentrations, which is typical of its ecological niche within the gastric mucus layer. This adaptation allows H. pylori to effectively evade the host's immune response and persist in the hostile gastric environment. The ability of H. pylori to maintain its structural integrity and metabolic functions under these conditions reflects its evolutionary specialization for survival in a unique ecological niche. This specialization may contribute to its role in various gastric conditions, although the specific pathogenic mechanisms and implications for human health associated with this strain are not detailed here. Understanding the physiological traits of H. pylori str. ATCC 43504 helps provide insights into its ecological dynamics and interactions within the human host.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori str. ATCC 43504

Accession NumberNZ_AP017633.1

Gene Summary

Adenine Count

488615 bp

Thymine Count

488780 bp

Guanine Count

310830 bp

Cytosine Count

314868 bp

Genome Length

1603093 bp

Protein-coding Genes

1494 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
abc transporter permeaseHPPMSS1_RS05770Not Available-1212710 - 121371436876.3
abc transporter substrate-binding proteinHPPMSS1_RS05775Not Available-1213726 - 121537562404.0
50s ribosomal protein l27HPPMSS1_RS05780Not Available-1215492 - 12157589778.76
50s ribosomal protein l21HPPMSS1_RS05785Not Available-1215773 - 121608711880.8
flagellar hook-associated protein flglHPPMSS1_RS05790Not Available+1216329 - 121881592130.2
aliphatic amidaseHPPMSS1_RS05795Not Available-1219141 - 122016037805.1
bifunctional chorismate-binding protein/class iv aminotransferaseHPPMSS1_RS05800Not Available-1220355 - 122203464847.2
duf2156 domain-containing proteinHPPMSS1_RS05805Not Available-1222035 - 122290733725.3
chorismate mutaseHPPMSS1_RS05810Not Available-1222920 - 122321011372.0
diaminopimelate decarboxylaseHPPMSS1_RS05815Not Available-1223215 - 122443245245.0

Displaying genes 1171 – 1180 of 1542 in total

Pathways

26 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites