Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Helicobacteraceae |
| Genus | Helicobacter |
| Species | Helicobacter pylori |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Helicobacter pylori str. 29CaP
Accession NumberNZ_CP012905.1
Gene Summary
Adenine Count
491352 bp
Thymine Count
499248 bp
Guanine Count
311836 bp
Cytosine Count
321991 bp
Genome Length
1624441 bp
Protein-coding Genes
1511 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vacuolating cytotoxin autotransporter | APV63_RS04125 | Q48253 | + | 864796 - 868734 | 142193.0 |
| abc transporter atp-binding protein | APV63_RS04130 | O05732 | - | 869084 - 869851 | 28683.5 |
| iron abc transporter permease | APV63_RS04135 | O05731 | - | 869851 - 870831 | 34646.0 |
| sdr family oxidoreductase | APV63_RS04140 | O05730 | - | 870824 - 871678 | 31477.3 |
| acyl-coa thioesterase | APV63_RS04145 | P0A0Q8 | + | 871818 - 872342 | 19495.6 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | APV63_RS04150 | P44041 | - | 872448 - 872714 | 10364.8 |
| duf3944 domain-containing protein | APV63_RS04155 | Not Available | - | 872695 - 873068 | 14510.6 |
| duf3944 domain-containing protein | APV63_RS04160 | Not Available | - | 873777 - 876004 | 79508.4 |
| Trna-met | Not Available | Not Available | + | 876334 - 876410 | Not Available |
| Trna-gln | Not Available | Not Available | + | 876433 - 876507 | Not Available |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Clavulanic acid Action Pathway
Clavulanic acid Action Pathway
Amoxicillin Action Pathway
Amoxicillin Action Pathway
Pixantrone Action Pathway
Pixantrone Action Pathway
