Helicobacter pylori str. 2021

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. 2021 is a Gram-negative, microaerophilic bacterium characterized by its spiral shape and single-cell arrangement. This strain thrives optimally at a temperature of 37.0°C, which aligns with its adaptation to a host-associated habitat, notably within the human gastric environment. The microaerophilic nature of H. pylori str. 2021 indicates its requirement for reduced oxygen concentrations, which is typical for organisms residing in the stomach, where oxygen levels are significantly lower than in the atmosphere. H. pylori is well-known for its role in the gastric microbiome, often colonizing the stomach lining and influencing gastric physiology. The unique morphology of this strain, coupled with its specific oxygen requirements, facilitates its survival and colonization in the acidic gastric niche. The presence of H. pylori str. 2021 within the host-associated environment suggests potential interactions with the host's immune system and microbiome, which may play a role in maintaining gastric homeostasis or contributing to dysbiosis in certain conditions. In summary, H. pylori str. 2021 exemplifies the intricate adaptations of microorganisms to their specific ecological niches, highlighting the balance between microbial survival strategies and host interactions in the complex environment of the human stomach.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strain2021

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. 2021
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain 2021 scaffold_9, whole genome shotgun

Gene Summary

Adenine Count

514280 bp

Thymine Count

512681 bp

Guanine Count

323576 bp

Cytosine Count

327977 bp

Genome Length

1678514 bp

Protein-coding Genes

1470 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
restriction endonucleaseBB468_00005Not AvailablePositive22 - 252397788.0
5s ribosomal rnaNot AvailableNot AvailablePositive61 - 178Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive842 - 3731Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive1447 - 1564Not Available
restriction endonucleaseBB468_00010Not AvailablePositive2517 - 437971349.5
5s ribosomal rnaNot AvailableNot AvailablePositive3968 - 4085Not Available
endonucleaseBB468_00015Not AvailablePositive4492 - 535533637.8
hypothetical proteinBB468_00020Not AvailableNegative5426 - 56779106.5
prephenate dehydrogenaseBB468_00025Not AvailableNegative5755 - 658230385.2
endopeptidase laBB468_00030Not AvailableNegative6591 - 908393735.6

Displaying genes 1 – 10 of 1514 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Peptic ulcer diseaseCausesPMC5203880
Gastric adenocarcinomaCausesPMC5203880
Mucosa-associated lymphoid tissue (malt) lymphomaCausesPMC5203880
Peptic ulcer diseaseCausesPMC7037374
GastritisCausesPMC7037374
Gastric cancerCausesPMC7037374
Functional dyspepsiaCausesPMC7037374
GastritisCausesPMC7459201
Gastric cancerCausesPMC7459201
Intestinal diseasesCausesPMC7459201

Displaying health effects 31 – 40 of 94 in total