Helicobacter pylori

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori is a microbe that thrives in a hostile environment within the human stomach. It belongs to the temperature preference category of Thermophilic, with an optimal growth temperature range of 37°C to 40°C. Its metabolism is that of a Chemoheterotroph, meaning it derives its energy by breaking down organic compounds and using them as a source of carbon and energy. H. pylori produces energy through anaerobic respiration, a process that involves the breakdown of nutrients without the presence of oxygen. The microbe's shape is characterized by a curved or spiral shape, often referred to as a "helix," which allows it to move and colonize the surfaces of the stomach lining. Gram staining reveals that H. pylori is a Gram-negative bacteria, which is typical of many pathogenic bacteria. In terms of body sites, H. pylori is found in the stomach and small intestine of approximately 50-60% of the global population. H. pylori is an Obligate Anaerobe, meaning it is unable to survive in the presence of oxygen and requires a low-oxygen or anaerobic environment to thrive. This unique adaptation allows it to colonize the stomach, where oxygen levels are low due to the presence of thick mucus and acidic conditions. Helicobacter pylori is a significant human pathogen, causing chronic gastritis, peptic ulcers, and gastric cancer. Its ability to colonize the stomach lining and evade the host's immune system allows it to persist for decades, making treatment challenging. Despite its reputation as a disease-causing agent, H. pylori has also been linked to the development of stomach cancer, with some studies suggesting that it may play a role in reducing the risk of stomach cancer in some individuals. In addition to its notorious reputation, H. pylori has also been studied for its potential role in the evolution of the human gut microbiome. The microbe's unique adaptations to the human stomach have allowed it to thrive in an environment that is hostile to many other microorganisms, making it a fascinating subject of study for microbiologists and evolutionary biologists alike.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori

Accession NumberMJGH00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1410 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

73

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
transcription antitermination factor nusbAA977_RS00005Q17Z26-19 - 43515516.0
6,7-dimethyl-8-ribityllumazine synthaseAA977_RS00010O24854-437 - 90716997.7
3-deoxy-8-phosphooctulonate synthaseAA977_RS00015P56060-917 - 174730276.6
carbonic anhydraseAA977_RS00020Q9ZN54-1734 - 239925607.6
orotidine-5'-phosphate decarboxylaseAA977_RS00025B2UW09+2519 - 320225215.9
pantoate--beta-alanine ligaseAA977_RS00030Q17Z21+3203 - 403331124.1
Trna-gluNot AvailableNot Available+4046 - 4121Not Available
Trna-aspNot AvailableNot Available+4179 - 4255Not Available
Trna-valNot AvailableNot Available+4299 - 4374Not Available
Trna-gluNot AvailableNot Available+4407 - 4481Not Available

Displaying genes 1 – 10 of 111893 in total

Pathways

26 pathways

Metabolites

86 records
Metabolite IDMetabolite nameStructureCAS number
BASm0032039PA(12:0/18:1(11Z))C33H63O8PChemical structure of PA(12:0/18:1(11Z))NULL
Average618.833Da
Monoisotopic618.426055987Da
BASm0032069PA(14:0/16:0)C33H65O8PChemical structure of PA(14:0/16:0)NULL
Average620.849Da
Monoisotopic620.441706051Da
BASm0032089PA(14:0/18:1(11Z))C35H67O8PChemical structure of PA(14:0/18:1(11Z))NULL
Average646.887Da
Monoisotopic646.457356115Da
BASm0033987PS(12:0/14:0)C32H62NO10PChemical structure of PS(12:0/14:0)NULL
Average651.819Da
Monoisotopic651.411134198Da
BASm0033995PS(12:0/18:1(11Z))C36H68NO10PChemical structure of PS(12:0/18:1(11Z))NULL
Average705.911Da
Monoisotopic705.458084392Da
BASm0034613Palmitoleyl-CoAC37H64N7O17P3SChemical structure of Palmitoleyl-CoA18198-76-0
Average1003.93Da
Monoisotopic1003.329225797Da

Displaying 81–86 of 86 metabolites