Helicobacter pylori

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori is a microbe that thrives in a hostile environment within the human stomach. It belongs to the temperature preference category of Thermophilic, with an optimal growth temperature range of 37°C to 40°C. Its metabolism is that of a Chemoheterotroph, meaning it derives its energy by breaking down organic compounds and using them as a source of carbon and energy. H. pylori produces energy through anaerobic respiration, a process that involves the breakdown of nutrients without the presence of oxygen. The microbe's shape is characterized by a curved or spiral shape, often referred to as a "helix," which allows it to move and colonize the surfaces of the stomach lining. Gram staining reveals that H. pylori is a Gram-negative bacteria, which is typical of many pathogenic bacteria. In terms of body sites, H. pylori is found in the stomach and small intestine of approximately 50-60% of the global population. H. pylori is an Obligate Anaerobe, meaning it is unable to survive in the presence of oxygen and requires a low-oxygen or anaerobic environment to thrive. This unique adaptation allows it to colonize the stomach, where oxygen levels are low due to the presence of thick mucus and acidic conditions. Helicobacter pylori is a significant human pathogen, causing chronic gastritis, peptic ulcers, and gastric cancer. Its ability to colonize the stomach lining and evade the host's immune system allows it to persist for decades, making treatment challenging. Despite its reputation as a disease-causing agent, H. pylori has also been linked to the development of stomach cancer, with some studies suggesting that it may play a role in reducing the risk of stomach cancer in some individuals. In addition to its notorious reputation, H. pylori has also been studied for its potential role in the evolution of the human gut microbiome. The microbe's unique adaptations to the human stomach have allowed it to thrive in an environment that is hostile to many other microorganisms, making it a fascinating subject of study for microbiologists and evolutionary biologists alike.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori

Accession NumberMJGH00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1410 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

73

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dethiobiotin synthaseAA977_RS00155Q9ZN34-29428 - 3008424532.7
hypothetical proteinAA977_RS00160Not Available-30088 - 3181266250.4
universal stress proteinAA977_RS00165P64650+31941 - 3235415502.8
atp-dependent clp protease adaptor clpsAA977_RS00170Q9ZN32+32356 - 3263110463.9
atp-dependent clp protease atp-binding subunitAA977_RS00175P05444+32631 - 3485383801.0
aspartate 1-decarboxylaseAA977_RS00180Q17ZL6+34843 - 3519312980.9
ybab/ebfc family nucleoid-associated proteinAA977_RS00185Q17ZL5+35204 - 3549710821.9
pdz domain-containing proteinAA977_RS00190Not Available+35497 - 3649238169.8
p-type conjugative transfer protein trblAA977_RS00195Not Available+36498 - 3756240161.2
hypothetical proteinAA977_RS00200Not Available+37578 - 376914291.5

Displaying genes 31 – 40 of 111893 in total

Pathways

26 pathways

Metabolites

86 records
Metabolite IDMetabolite nameStructureCAS number
BASm0019214PS(16:1(9Z)/18:1(9Z))C40H74NO10PChemical structure of PS(16:1(9Z)/18:1(9Z))NULL
Average760.003Da
Monoisotopic759.505034585Da
BASm0020025myristoyl-CoAC35H62N7O17P3SChemical structure of myristoyl-CoA3130-72-1
Average977.89Da
Monoisotopic977.313573819Da
BASm0020027oleoyl-CoAC39H68N7O17P3SChemical structure of oleoyl-CoA1716-06-9
Average1031.98Da
Monoisotopic1031.360524011Da
BASm0020161PA(12:0/16:0)C31H61O8PChemical structure of PA(12:0/16:0)NULL
Average592.785Da
Monoisotopic592.41040544Da
BASm0020162PA(12:0/16:1(9Z))C31H59O8PChemical structure of PA(12:0/16:1(9Z))NULL
Average590.7691Da
Monoisotopic590.394755376Da
BASm0020164PA(14:1(9Z)/16:0)C33H63O8PChemical structure of PA(14:1(9Z)/16:0)NULL
Average618.8223Da
Monoisotopic618.426055504Da
BASm0020166PA(16:1(9Z)/18:1(9Z))C37H69O8PChemical structure of PA(16:1(9Z)/18:1(9Z))NULL
Average672.9127Da
Monoisotopic672.473005696Da
BASm0020169PA(18:0/18:1(9Z))C39H75O8PChemical structure of PA(18:0/18:1(9Z))384833-24-3
Average702.9818Da
Monoisotopic702.519955888Da
BASm0020176PE(14:1(9Z)/16:0)C35H68NO8PChemical structure of PE(14:1(9Z)/16:0)NULL
Average661.8901Da
Monoisotopic661.468254669Da
BASm0020207PS(12:0/16:0)C34H66NO10PChemical structure of PS(12:0/16:0)NULL
Average679.8623Da
Monoisotopic679.442433849Da

Displaying 61–70 of 86 metabolites