Helicobacter pylori

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori is a microbe that thrives in a hostile environment within the human stomach. It belongs to the temperature preference category of Thermophilic, with an optimal growth temperature range of 37°C to 40°C. Its metabolism is that of a Chemoheterotroph, meaning it derives its energy by breaking down organic compounds and using them as a source of carbon and energy. H. pylori produces energy through anaerobic respiration, a process that involves the breakdown of nutrients without the presence of oxygen. The microbe's shape is characterized by a curved or spiral shape, often referred to as a "helix," which allows it to move and colonize the surfaces of the stomach lining. Gram staining reveals that H. pylori is a Gram-negative bacteria, which is typical of many pathogenic bacteria. In terms of body sites, H. pylori is found in the stomach and small intestine of approximately 50-60% of the global population. H. pylori is an Obligate Anaerobe, meaning it is unable to survive in the presence of oxygen and requires a low-oxygen or anaerobic environment to thrive. This unique adaptation allows it to colonize the stomach, where oxygen levels are low due to the presence of thick mucus and acidic conditions. Helicobacter pylori is a significant human pathogen, causing chronic gastritis, peptic ulcers, and gastric cancer. Its ability to colonize the stomach lining and evade the host's immune system allows it to persist for decades, making treatment challenging. Despite its reputation as a disease-causing agent, H. pylori has also been linked to the development of stomach cancer, with some studies suggesting that it may play a role in reducing the risk of stomach cancer in some individuals. In addition to its notorious reputation, H. pylori has also been studied for its potential role in the evolution of the human gut microbiome. The microbe's unique adaptations to the human stomach have allowed it to thrive in an environment that is hostile to many other microorganisms, making it a fascinating subject of study for microbiologists and evolutionary biologists alike.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori

Accession NumberMJGH00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1410 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

73

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dethiobiotin synthaseAA977_RS00155Q9ZN34-29428 - 3008424532.7
hypothetical proteinAA977_RS00160Not Available-30088 - 3181266250.4
universal stress proteinAA977_RS00165P64650+31941 - 3235415502.8
atp-dependent clp protease adaptor clpsAA977_RS00170Q9ZN32+32356 - 3263110463.9
atp-dependent clp protease atp-binding subunitAA977_RS00175P05444+32631 - 3485383801.0
aspartate 1-decarboxylaseAA977_RS00180Q17ZL6+34843 - 3519312980.9
ybab/ebfc family nucleoid-associated proteinAA977_RS00185Q17ZL5+35204 - 3549710821.9
pdz domain-containing proteinAA977_RS00190Not Available+35497 - 3649238169.8
p-type conjugative transfer protein trblAA977_RS00195Not Available+36498 - 3756240161.2
hypothetical proteinAA977_RS00200Not Available+37578 - 376914291.5

Displaying genes 31 – 40 of 111893 in total

Pathways

26 pathways

Metabolites

86 records
Metabolite IDMetabolite nameStructureCAS number
BASm0017691PS(14:0/18:1(11Z))C38H72NO10PChemical structure of PS(14:0/18:1(11Z))NULL
Average733.965Da
Monoisotopic733.48938452Da
BASm0017743Stearoyl-CoAC39H70N7O17P3SChemical structure of Stearoyl-CoA362-66-3
Average1033.996Da
Monoisotopic1033.376174075Da
BASm0017775PE(12:0/14:0)C31H62NO8PChemical structure of PE(12:0/14:0)NULL
Average607.81Da
Monoisotopic607.421304958Da
BASm0017777PE(12:0/16:0)C33H66NO8PChemical structure of PE(12:0/16:0)NULL
Average635.864Da
Monoisotopic635.452605087Da
BASm0017778PE(12:0/16:1(9Z))C33H64NO8PChemical structure of PE(12:0/16:1(9Z))NULL
Average633.848Da
Monoisotopic633.436955023Da
BASm0017781PE(12:0/18:1(11Z))C35H68NO8PChemical structure of PE(12:0/18:1(11Z))NULL
Average661.902Da
Monoisotopic661.468255152Da
BASm0018523CDP-DG(12:0/14:0)C38H69N3O15P2Chemical structure of CDP-DG(12:0/14:0)NULL
Average869.924Da
Monoisotopic869.42039253Da
BASm0018525CDP-DG(12:0/16:0)C40H73N3O15P2Chemical structure of CDP-DG(12:0/16:0)NULL
Average897.978Da
Monoisotopic897.451692659Da
BASm0018526CDP-DG(12:0/16:1(9Z))C40H71N3O15P2Chemical structure of CDP-DG(12:0/16:1(9Z))NULL
Average895.962Da
Monoisotopic895.436042594Da
BASm0018533CDP-DG(14:0/16:0)C42H77N3O15P2Chemical structure of CDP-DG(14:0/16:0)NULL
Average926.032Da
Monoisotopic925.482992787Da

Displaying 21–30 of 86 metabolites