Helicobacter pylori str. ZH139

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ZH139 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and single-cell arrangement. This strain thrives optimally at 37.0°C, which aligns with the typical human body temperature, suggesting its adaptation to a host-associated habitat. H. pylori is predominantly found in the gastric mucosa of humans and is known for its ability to survive in the acidic environment of the stomach, which is critical for its ecological niche. The microaerophilic nature of H. pylori indicates that it requires reduced levels of oxygen for growth, which is indicative of its specialized adaptation to the gastric environment where oxygen levels are lower than in the atmosphere. The unique morphology of H. pylori, with its spiral shape, facilitates motility through the viscous gastric mucus, enhancing its ability to colonize and establish itself within the gastric epithelium. Understanding the specific traits of Helicobacter pylori str. ZH139 contributes to the broader knowledge of microbial life in human-associated environments, highlighting the intricate adaptations that enable survival in such a challenging habitat. Further exploration of this strain may provide insights into the complex interactions between host and microbe, as well as the potential for influencing gastric health and disease outcomes.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainZH139

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ZH139
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH139 40, whole genome shotgun

Gene Summary

Adenine Count

507122 bp

Thymine Count

504076 bp

Guanine Count

327593 bp

Cytosine Count

313540 bp

Genome Length

1655117 bp

Protein-coding Genes

1492 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive496 - 2004Not Available
hypothetical proteinEDC13_00005Not AvailableNegative2 - 78129249.1
peptidylprolyl isomeraseEDC13_00010Not AvailablePositive902 - 139317802.3
23s ribosomal rnaNot AvailableNot AvailablePositive903 - 3790Not Available
carbon storage regulatorEDC13_00015Not AvailablePositive1411 - 16418396.29
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseEDC13_00020Not AvailablePositive1638 - 244430097.2
ssra-binding proteinEDC13_00025Not AvailablePositive2441 - 289917825.1
tonb-system energizer exbbEDC13_00030Not AvailablePositive2902 - 335416666.0
biopolymer transporter exbdEDC13_00035Not AvailablePositive3365 - 376615042.4
50s ribosomal protein l34EDC13_00040Not AvailablePositive3838 - 39725246.63

Displaying genes 1 – 10 of 1534 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gastric cancerCausesPMC10756867
GcCausesPMC12053057
GastritisCausesPMC12250555
Peptic ulcer diseaseCausesPMC12250555
Gastric cancerCausesPMC12745834
Gasteric ulcersCausesPMC2653234
Asymptomatic mucosal inflammatory responseCausesPMC3207844
Gastric carcinomaCausesPMC3208570
GastritisCausesPMC3250449
HypochlorhydriaCausesPMC3250449

Displaying health effects 11 – 20 of 94 in total