Helicobacter pylori str. ZH116

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain ZH116 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and single-cell arrangement. This strain thrives optimally at a temperature of 37.0°C, suggesting an adaptation to the warm environment of its host. H. pylori is typically associated with the gastric mucosa of humans and other mammals, indicating that ZH116 is likely to inhabit similar host-associated environments. As a microaerophilic organism, H. pylori strain ZH116 requires reduced levels of oxygen for growth, which is consistent with its ecological niche in the stomach, where oxygen concentration is lower than in the atmosphere. This adaptation may play a crucial role in its survival and persistence within the acidic gastric environment. The specific metabolic pathways and interactions of H. pylori strain ZH116 within its host remain to be fully characterized, but its unique morphological and physiological traits may influence its ecological dynamics in the host's microbiome. The ability to thrive in such a specific microenvironment underscores the significance of H. pylori in the context of host-microbe interactions, potentially impacting gastric health and disease outcomes.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori str. ZH116

Accession NumberRJIB00000000.1

Gene Summary

Adenine Count

479271 bp

Thymine Count

485454 bp

Guanine Count

303383 bp

Cytosine Count

312597 bp

Genome Length

1583771 bp

Protein-coding Genes

1443 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ligand-gated channelEC573_04515Not Available+918221 - 92052487507.7
flagellar biosynthetic protein flipEC573_04520Not Available-920561 - 92130727829.6
flagellar biosynthesis protein flipEC573_04525Not Available-921340 - 9214323412.46
bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmuEC573_04530Not Available+921389 - 92269047740.7
pantothenate kinaseEC573_04535Not Available+922876 - 92322612548.0
hypothetical proteinEC573_04540Not Available+923266 - 92376919044.3
ribonucleoside-diphosphate reductase subunit alphaEC573_04545Not Available+923934 - 92630090236.0
gfo/idh/moca family oxidoreductaseEC573_04550Not Available+926362 - 92730935973.1
sulfite exporter taue/safe family proteinEC573_04555Not Available+927423 - 92819027506.4
methylated-dna--[protein]-cysteine s-methyltransferaseEC573_04560Not Available+928194 - 92869118907.9

Displaying genes 861 – 870 of 1485 in total

Pathways

26 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites