Helicobacter pylori str. ZH113

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain ZH113 is a Gram-negative bacterium characterized by its spirilla shape and single-cell arrangement. This microbe exhibits optimal growth at a temperature of 37.0°C, suggesting a physiological adaptation to the human body, where it is typically found in a host-associated habitat. As a microaerophilic organism, H. pylori str. ZH113 requires reduced oxygen levels for growth, which aligns with its ecological niche within the gastric environment, where oxygen concentration is lower than in the atmosphere. The unique morphology and specific environmental requirements of H. pylori strain ZH113 may influence its interaction with the host's immune system and its ability to colonize the gastric mucosa. Understanding these traits is crucial for elucidating the bacterium's role in gastric health and disease. The microaerophilic nature of this strain may also inform strategies for targeted treatments that consider the oxygen levels within the gastric niche.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainZH113

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ZH113
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH113 25, whole genome shotgun

Gene Summary

Adenine Count

483954 bp

Thymine Count

492150 bp

Guanine Count

310344 bp

Cytosine Count

311651 bp

Genome Length

1599835 bp

Protein-coding Genes

1439 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane proteinEC570_00005Not AvailablePositive1 - 45116974.2
16s ribosomal rnaNot AvailableNot AvailablePositive497 - 2005Not Available
sulfite exporter taue/safe family proteinEC570_00010Not AvailablePositive664 - 149729722.5
23s ribosomal rnaNot AvailableNot AvailablePositive1042 - 3928Not Available
peptide-methionine (r)-s-oxide reductaseEC570_00015Not AvailableNegative1893 - 297241196.1
5s ribosomal rnaNot AvailableNot AvailablePositive4165 - 4282Not Available
dna repair protein radaEC570_00020Not AvailableNegative3094 - 446450318.4
copg family transcriptional regulatorEC570_00025Not AvailableNegative4552 - 47858976.64
iron-sulfur cluster assembly scaffold protein nifuEC570_00030Not AvailableNegative4947 - 592736295.8
cysteine desulfurase iscsEC570_00035Not AvailableNegative5949 - 711242420.0

Displaying genes 1 – 10 of 1481 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CancerCausesPMC4433339
Chronic gastritisCausesPMC8760755
Peptic ulcersCausesPMC8760755
Gastric cancerCausesPMC9093563

Displaying health effects 91 – 94 of 94 in total