Helicobacter pylori str. 3004

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain 3004 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and singular cell arrangement. This organism thrives optimally at 37.0°C, which aligns with the average human body temperature, suggesting its adaptation to a host-associated habitat. Helicobacter pylori is known for its colonization of the gastric mucosa, where it plays a significant role in gastrointestinal microbiota. The microaerophilic nature of H. pylori indicates that it requires reduced oxygen levels for growth, which is consistent with its habitat within the gastric environment, where oxygen is limited. The Gram-negative cell wall structure of this bacterium, characterized by a thin peptidoglycan layer surrounded by an outer membrane, may contribute to its resilience in the acidic conditions of the stomach. Given its specific adaptations, including optimal growth temperature and oxygen requirements, H. pylori strain 3004 exemplifies the intricate relationship between microbial physiology and its ecological niche within the host. Understanding these traits is essential for further studies on its role in the human microbiome and potential implications for digestive health.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori str. 3004

Accession NumberMBIX00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1498 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
lysine transporterBB459_07710Not Available-1339174 - 133980623204.6
hypothetical proteinBB459_07715Not Available+1340074 - 134049616036.6
zinc abc transporter substrate-binding proteinBB459_07720Not Available+1340525 - 134098317540.9
hypothetical proteinBB459_07725Not Available+1341306 - 134295560536.5
tautomeraseBB459_07735Not Available-1343261 - 13434677526.1
recombination protein recrBB459_07740Not Available+1343899 - 134448022012.5
trna pseudouridine(13) synthase trudBB459_07745Not Available+1344477 - 134562244089.2
zinc metalloprotease htpxBB459_07750Not Available+1345609 - 134654135371.8
gtp cyclohydrolase i foleBB459_07755Not Available+1346542 - 134708420870.6
geranyl transferaseBB459_07760Not Available+1347100 - 134801134208.3

Displaying genes 1231 – 1240 of 1540 in total

Pathways

26 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites