Helicobacter pylori str. 1002

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. 1002 is a Gram-negative, microaerophilic bacterium characterized by its distinct spirilla shape and arrangement in singles. This organism thrives optimally at a temperature of 37.0°C, which aligns with its habitat within a host-associated environment, typically residing in the gastric mucosa of mammals. The microaerophilic nature of H. pylori str. 1002 suggests that it requires reduced levels of oxygen for growth, which is consistent with the low-oxygen conditions often found in the stomach. The bacterium's spiral form may facilitate its motility through the viscous gastric environment, potentially enhancing its ability to colonize and persist in the highly acidic conditions of the stomach. Given its adaptation to a host-associated habitat and optimal growth temperature, H. pylori str. 1002 likely plays a significant role in the microbial ecology of the gastric environment, contributing to the complex interactions between the host and its microbiota. This relationship highlights the potential influence of H. pylori on gastric health and disease, as its presence and behavior in the host can impact overall digestive functions and host immunity. Further exploration of its ecological role may provide insights into the dynamics of stomach microbiomes and their implications for gastrointestinal health.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori str. 1002

Accession NumberRPFS00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1466 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
outer membrane beta-barrel protein hoffEGW00_07140Not Available-1437419 - 143891856915.1
abc transporter permeaseEGW00_07145Not Available-1439200 - 144043246136.3
preprotein translocase subunit secaEGW00_07150Not Available-1440422 - 144301999059.1
outer membrane lipoprotein chaperone lolaEGW00_07155Not Available+1443167 - 144372121435.2
Tmrna,resume consensus sequence (at 77): aataactgtaaacaacgcNot AvailableNot Available+1443788 - 1444172Not Available
hypothetical proteinEGW00_07165Not Available+1444215 - 144474219979.8
outer membrane beta-barrel protein hofeEGW00_07170Not Available-1444749 - 144611952242.1
is701 family transposaseEGW00_07175Not Available-1446212 - 144750149543.3
hypothetical proteinEGW00_07180Not Available-1447770 - 144803610126.4
bifunctional aconitate hydratase 2/2-methylisocitrate dehydrataseEGW00_07185Not Available-1448118 - 145067992853.1

Displaying genes 1341 – 1350 of 1508 in total

Pathways

26 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites