Helicobacter pylori str. 1002

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. 1002 is a Gram-negative, microaerophilic bacterium characterized by its distinct spirilla shape and arrangement in singles. This organism thrives optimally at a temperature of 37.0°C, which aligns with its habitat within a host-associated environment, typically residing in the gastric mucosa of mammals. The microaerophilic nature of H. pylori str. 1002 suggests that it requires reduced levels of oxygen for growth, which is consistent with the low-oxygen conditions often found in the stomach. The bacterium's spiral form may facilitate its motility through the viscous gastric environment, potentially enhancing its ability to colonize and persist in the highly acidic conditions of the stomach. Given its adaptation to a host-associated habitat and optimal growth temperature, H. pylori str. 1002 likely plays a significant role in the microbial ecology of the gastric environment, contributing to the complex interactions between the host and its microbiota. This relationship highlights the potential influence of H. pylori on gastric health and disease, as its presence and behavior in the host can impact overall digestive functions and host immunity. Further exploration of its ecological role may provide insights into the dynamics of stomach microbiomes and their implications for gastrointestinal health.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori str. 1002

Accession NumberRPFS00000000.1

Gene Summary

Adenine Count

490823 bp

Thymine Count

489787 bp

Guanine Count

319381 bp

Cytosine Count

309946 bp

Genome Length

1612768 bp

Protein-coding Genes

1466 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Trna-serNot AvailableNot Available+815572 - 815659Not Available
hypothetical proteinEGW00_03990Not Available-815702 - 81610915374.6
prokaryotic metallothionein family proteinEGW00_03995Not Available-816112 - 81640511324.0
16s rrna (guanine(527)-n(7))-methyltransferase rsmgEGW00_04000Not Available-816348 - 81688420624.2
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaEGW00_04005Not Available-816881 - 81791839834.3
twin-arginine translocase subunit tatcEGW00_04010Not Available-817919 - 81866827803.6
sec-independent protein translocase subunit tatbEGW00_04015Not Available-818661 - 81911317271.6
holliday junction branch migration dna helicase ruvbEGW00_04020Not Available-819181 - 82019137321.5
3-methyl-2-oxobutanoate hydroxymethyltransferaseEGW00_04025Not Available-820192 - 82100429880.5
hypothetical proteinEGW00_04030Not Available+821153 - 82187527355.2

Displaying genes 751 – 760 of 1508 in total

Pathways

26 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites