Capnocytophaga ochracea

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga ochracea is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and tendency to form chains or exist as single cells. This organism inhabits diverse environments, indicating its capacity to adapt to various ecological niches. Its microaerophilic nature suggests that it thrives in environments with low oxygen levels, which could influence its interactions with other microbial communities and its role in biogeochemical cycles. The unique morphology of C. ochracea, along with its cell arrangement, may play a role in its ecological functions, potentially affecting nutrient cycling and microbial dynamics in its habitats. The ability to form chains could facilitate nutrient exchange and communication between cells, enhancing its survival and adaptability in microaerophilic conditions. This trait might also influence its interactions with other microorganisms, including potential symbiotic relationships or competition for resources. Overall, the adaptability of Capnocytophaga ochracea to varying habitats and its specific oxygen requirements provide insights into the ecological roles of microaerophilic bacteria in diverse environments. Understanding these traits can contribute to broader discussions on microbial ecology and the maintenance of ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga ochracea
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Capnocytophaga ochracea

Accession NumberUYIQ00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2269 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiation proteinNCTC11458_00001Not Available+1 - 142253685.2
16s ribosomal rnaNot AvailableNot Available+1147 - 2648Not Available
alanine dehydrogenase 2NCTC11458_00002Not Available+1422 - 259442842.5
uncharacterised proteinNCTC11458_00003Not Available-2686 - 302712972.3
23s ribosomal rnaNot AvailableNot Available+3279 - 6110Not Available
alpha/beta hydrolase domain-containing proteinNCTC11458_00004Not Available-2991 - 390533304.4
outer membrane efflux protein bepc precursorNCTC11458_00005Not Available-4096 - 539149121.4
uncharacterised proteinNCTC11458_00006Not Available-5529 - 584011910.6
5s ribosomal rnaNot AvailableNot Available+6237 - 6342Not Available
uncharacterised proteinNCTC11458_00007Not Available-6196 - 747049474.8

Displaying genes 1 – 10 of 2334 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm00189062-Acyl-sn-glycero-3-phosphoglycerol (N-C18:1)C24H46O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C18:1)NULL
Average509.5904Da
Monoisotopic509.287944582Da
BASm00189092-dodecanoyl-sn-glycerol 3-phosphateC15H31O7PChemical structure of 2-dodecanoyl-sn-glycerol 3-phosphateNULL
Average354.3762Da
Monoisotopic354.180739858Da
BASm00189102-hexadec-9-enoyl-sn-glycerol 3-phosphateC19H37O7PNot availableNULL
Average408.472Da
Monoisotopic408.227690529Da
BASm00189112-hexadecanoyl-sn-glycerol 3-phosphateC19H39O7PNot availableNULL
Average410.488Da
Monoisotopic410.243340594Da
BASm00189122-octadec-11-enoyl-sn-glycerol 3-phosphateC21H41O7PNot availableNULL
Average436.526Da
Monoisotopic436.258990658Da
BASm00189132-octadecanoyl-sn-glycerol 3-phosphateC21H43O7PChemical structure of 2-octadecanoyl-sn-glycerol 3-phosphateNULL
Average438.5357Da
Monoisotopic438.274640242Da
BASm00189142-tetradec-7-enoyl-sn-glycerol 3-phosphateC17H33O7PChemical structure of 2-tetradec-7-enoyl-sn-glycerol 3-phosphateNULL
Average380.4135Da
Monoisotopic380.196389922Da
BASm00189152-tetradecanoyl-sn-glycerol 3-phosphateC17H35O7PChemical structure of 2-tetradecanoyl-sn-glycerol 3-phosphateNULL
Average382.4294Da
Monoisotopic382.212039986Da
BASm0018974Tetradecenoate (N-C14:1)C14H25O2Chemical structure of Tetradecenoate (N-C14:1)NULL
Average225.3471Da
Monoisotopic225.185455044Da
BASm0019191PE(16:1(9Z)/18:1(9Z))C39H74NO8PChemical structure of PE(16:1(9Z)/18:1(9Z))NULL
Average715.994Da
Monoisotopic715.515205345Da

Displaying 51–60 of 88 metabolites