Capnocytophaga ochracea

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga ochracea is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and tendency to form chains or exist as single cells. This organism inhabits diverse environments, indicating its capacity to adapt to various ecological niches. Its microaerophilic nature suggests that it thrives in environments with low oxygen levels, which could influence its interactions with other microbial communities and its role in biogeochemical cycles. The unique morphology of C. ochracea, along with its cell arrangement, may play a role in its ecological functions, potentially affecting nutrient cycling and microbial dynamics in its habitats. The ability to form chains could facilitate nutrient exchange and communication between cells, enhancing its survival and adaptability in microaerophilic conditions. This trait might also influence its interactions with other microorganisms, including potential symbiotic relationships or competition for resources. Overall, the adaptability of Capnocytophaga ochracea to varying habitats and its specific oxygen requirements provide insights into the ecological roles of microaerophilic bacteria in diverse environments. Understanding these traits can contribute to broader discussions on microbial ecology and the maintenance of ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga ochracea
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Capnocytophaga ochracea

Accession NumberUYIQ00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2269 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiation proteinNCTC11458_00001Not Available+1 - 142253685.2
16s ribosomal rnaNot AvailableNot Available+1147 - 2648Not Available
alanine dehydrogenase 2NCTC11458_00002Not Available+1422 - 259442842.5
uncharacterised proteinNCTC11458_00003Not Available-2686 - 302712972.3
23s ribosomal rnaNot AvailableNot Available+3279 - 6110Not Available
alpha/beta hydrolase domain-containing proteinNCTC11458_00004Not Available-2991 - 390533304.4
outer membrane efflux protein bepc precursorNCTC11458_00005Not Available-4096 - 539149121.4
uncharacterised proteinNCTC11458_00006Not Available-5529 - 584011910.6
5s ribosomal rnaNot AvailableNot Available+6237 - 6342Not Available
uncharacterised proteinNCTC11458_00007Not Available-6196 - 747049474.8

Displaying genes 1 – 10 of 2334 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0017691PS(14:0/18:1(11Z))C38H72NO10PChemical structure of PS(14:0/18:1(11Z))NULL
Average733.965Da
Monoisotopic733.48938452Da
BASm0017737PG(14:1(7Z)/14:1(7Z))C34H63O10PChemical structure of PG(14:1(7Z)/14:1(7Z))NULL
Average662.842Da
Monoisotopic662.415885227Da
BASm0017743Stearoyl-CoAC39H70N7O17P3SChemical structure of Stearoyl-CoA362-66-3
Average1033.996Da
Monoisotopic1033.376174075Da
BASm0017775PE(12:0/14:0)C31H62NO8PChemical structure of PE(12:0/14:0)NULL
Average607.81Da
Monoisotopic607.421304958Da
BASm0017777PE(12:0/16:0)C33H66NO8PChemical structure of PE(12:0/16:0)NULL
Average635.864Da
Monoisotopic635.452605087Da
BASm0017778PE(12:0/16:1(9Z))C33H64NO8PChemical structure of PE(12:0/16:1(9Z))NULL
Average633.848Da
Monoisotopic633.436955023Da
BASm0017781PE(12:0/18:1(11Z))C35H68NO8PChemical structure of PE(12:0/18:1(11Z))NULL
Average661.902Da
Monoisotopic661.468255152Da
BASm0018523CDP-DG(12:0/14:0)C38H69N3O15P2Chemical structure of CDP-DG(12:0/14:0)NULL
Average869.924Da
Monoisotopic869.42039253Da
BASm0018525CDP-DG(12:0/16:0)C40H73N3O15P2Chemical structure of CDP-DG(12:0/16:0)NULL
Average897.978Da
Monoisotopic897.451692659Da
BASm0018526CDP-DG(12:0/16:1(9Z))C40H71N3O15P2Chemical structure of CDP-DG(12:0/16:1(9Z))NULL
Average895.962Da
Monoisotopic895.436042594Da

Displaying 21–30 of 88 metabolites