Mesorhizobium opportunistum WSM2075

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Mesorhizobium

Description

Mesorhizobium opportunistum WSM2075.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusMesorhizobium
SpeciesMesorhizobium opportunistum
StrainWSM2075

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Biserrula pelecinus L
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mesorhizobium opportunistum WSM2075

Accession NumberNC_015675.1

Gene Summary

Adenine Count

1275452 bp

Thymine Count

1280917 bp

Guanine Count

2181706 bp

Cytosine Count

2146369 bp

Genome Length

6884444 bp

Protein-coding Genes

6615 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hsp70 family proteinMESOP_RS32770P36928+6853876 - 685513245583.7
lysr family transcriptional regulatorMESOP_RS32775P0ACR6-6855276 - 685617832166.7
molybdopterin oxidoreductase family proteinMESOP_RS32780D3RNN8+6856445 - 6859375108102.0
4fe-4s dicluster domain-containing proteinMESOP_RS32785D3RNN7+6859372 - 686010626467.5
dmsc/ynfh family molybdoenzyme membrane anchor subunitMESOP_RS32790D3RNN6+6860110 - 686104533644.6
ligase-associated dna damage response endonuclease pdemMESOP_RS32795Not Available-6861048 - 686176425897.3
ligase-associated dna damage response dexh box helicaseMESOP_RS32800Q57742-6861761 - 686429593458.9
nlpc/p60 family proteinMESOP_RS32805O35010-6864549 - 686540930723.8
marr family winged helix-turn-helix transcriptional regulatorMESOP_RS32810Not Available-6865437 - 686578713125.3
m17 family metallopeptidaseMESOP_RS32815Q5L681-6865860 - 686722447433.3

Displaying genes 6671 – 6680 of 6698 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

396 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0010887(4R,5S)-dethiobiotinC10H18N2O3Chemical structure of (4R,5S)-dethiobiotin533-48-2
Average214.2615Da
Monoisotopic214.1317425Da
BASm00110183-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethyl-2-pyrrolidin-2-oneC13H19N2O2Chemical structure of 3-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethyl-2-pyrrolidin-2-oneNot available
Average235.306Da
Monoisotopic235.1441043Da
BASm0011145(3Z,5E)-dodecadienoyl-CoAC33H50N7O17P3SChemical structure of (3Z,5E)-dodecadienoyl-CoANot available
Average941.78Da
Monoisotopic941.221869666Da
BASm0011146(3Z,5E)-dodecadienoateC12H19O2Chemical structure of (3Z,5E)-dodecadienoateNot available
Average195.283Da
Monoisotopic195.139053432Da
BASm00111563-hydroxydodecanoyl-CoAC33H54N7O18P3SChemical structure of 3-hydroxydodecanoyl-CoANot available
Average961.81Da
Monoisotopic961.248084414Da
BASm0012597(6R)-10-formyltetrahydrofolateC20H21N7O7Chemical structure of (6R)-10-formyltetrahydrofolateNot available
Average471.431Da
Monoisotopic471.151343204Da

Displaying 391–396 of 396 metabolites