Mesorhizobium opportunistum WSM2075

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Mesorhizobium

Description

Mesorhizobium opportunistum WSM2075.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusMesorhizobium
SpeciesMesorhizobium opportunistum
StrainWSM2075

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Biserrula pelecinus L
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mesorhizobium opportunistum WSM2075

Accession NumberNC_015675.1

Gene Summary

Adenine Count

1275452 bp

Thymine Count

1280917 bp

Guanine Count

2181706 bp

Cytosine Count

2146369 bp

Genome Length

6884444 bp

Protein-coding Genes

6615 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rhamnose abc transporter substrate-binding proteinMESOP_RS32460Q1C135+6782894 - 678388934787.8
sugar abc transporter atp-binding proteinMESOP_RS32465Q92S10+6784007 - 678556355592.5
abc transporter permeaseMESOP_RS32470A4WER3+6785560 - 678653734171.2
abc transporter permeaseMESOP_RS32475Not Available+6786534 - 678752935255.6
l-rhamnose mutarotaseMESOP_RS32480Q98B72+6787529 - 678784612252.8
fggy-family carbohydrate kinaseMESOP_RS32485Not Available+6787843 - 678921948881.2
d-amino acid dehydrogenaseMESOP_RS32490Q98B75-6789413 - 679066345137.2
udp-glucose 4-epimerase galeMESOP_RS32495Q59083-6790763 - 679175835610.2
5-aminolevulinate synthaseMESOP_RS32500P08262+6792036 - 679331346024.1
pyridoxal phosphate-dependent aminotransferaseMESOP_RS32505Q8KDS8-6793387 - 679455342111.1

Displaying genes 6611 – 6620 of 6698 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

396 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–10 of 396 metabolites