Xylella fastidiosa Temecula1

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Xanthomonadales

Family

Xanthomonadaceae

Genus

Xylella

Description

Xylella fastidiosa is a gram negative, fastidious, xylem-limited bacterium that causes a range of economically important plant diseases including citrus variegated chlorosis disease (CVC) of oranges and other citrus fruits.X. fastidiosa is also know to cause Pierces disease, a lethal disease to grapevines.The bacterium is spread by certain kinds of leafhoppers known as sharpshooters. While snacking, these insects carry the bacterial infection from plant to plant, transferring X. fastidiosa directly into the plant's xylem, the vascular tissues. There, the bacteria multiply, clogging the plant's internal plumbing and blocking the flow of water to leaves. Trees and plants weaken, leaves discolour, and fruits appear prematurely, remaining small, hard and worthless. Other strains cause leaf scorching of woody perennials such as American elm, maple, mulberry, or plum.The genome sequence reveals the presence of homologues of virulence factors in animal pathogens. Also, genes involved in ion-sequestration and the production of toxins and antibiotics were detected. Such genes may have been acquired by X. fastidiosa (via horizontal gene transfer) to respond to plant defence mechanisms or pesticidal control.Xylella fastidiosa was the first plant pathogen and the first plant associated bacterium to have been sequenced.(From http://www.ebi.ac.uk/2can/genomes/bacteria.html) (BacMap)

Taxonomy

KingdomPseudomonadati
PhylumProteobacteria
ClassGammaproteobacteria
OrderXanthomonadales
FamilyXanthomonadaceae
GenusXylella
Speciesfastidiosa
StrainTemecula1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa Temecula1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Grapevine
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Xylella fastidiosa Temecula1


Gene Summary

Adenine Count

224 bp

Thymine Count

398 bp

Guanine Count

390 bp

Cytosine Count

334 bp

Genome Length

1346 bp

Protein-coding Genes

1 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Ci repressorPD_RS05285Not Available+1206636 - 120731025003.3
Hypothetical proteinPD_RS05290Not Available-1207361 - 120797222833.9
antitoxin vbha family proteinPD_RS05295Not Available-1207969 - 12081576838.14
hypothetical proteinPD_RS05305Not Available+1208549 - 120908519035.7
duf1566 domain-containing proteinPD_RS05310Not Available+1209082 - 120949515369.8
Gp14PD_RS05315Not Available+1209492 - 120989315300.7
hypothetical proteinPD_RS12700Not Available+1209890 - 12100395507.76
hypothetical proteinPD_RS13090Not Available+1210257 - 12104035503.73
Gp13PD_RS05320Not Available+1210426 - 12106177280.77
Hypothetical proteinPD_RS05325Not Available+1210638 - 121098212612.2

Displaying genes 2411 – 2420 of 4546 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

373 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0002759dTDP-beta-L-rhamnoseC16H24N2O15P2Not availableNot available
Average546.316Da
Monoisotopic546.066289237Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0017273N10-Formyl-THFC20H23N7O7Chemical structure of N10-Formyl-THF2800-34-2
Average473.4393Da
Monoisotopic473.165896125Da
BASm0017276PhosphoribosylformylglycineamidineC8H16N3O8PChemical structure of Phosphoribosylformylglycineamidine37721-04-3
Average313.2017Da
Monoisotopic313.067501015Da
BASm0017282Dihydrofolic acidC19H21N7O6Chemical structure of Dihydrofolic acid4033-27-6
Average443.4133Da
Monoisotopic443.155331439Da
BASm00173085'-Phosphoribosyl-N-formylglycineamideC8H15N2O9PChemical structure of 5'-Phosphoribosyl-N-formylglycineamideNULL
Average314.1865Da
Monoisotopic314.0515166Da
BASm0017310dTDP-D-GlucoseC16H26N2O16P2Chemical structure of dTDP-D-Glucose2196-62-5
Average564.329Da
Monoisotopic564.075755818Da
BASm00173165,10-Methylene-THFC20H23N7O6Chemical structure of 5,10-Methylene-THF31690-11-6
Average457.4399Da
Monoisotopic457.170981503Da
BASm0017328AICARC9H15N4O8PChemical structure of AICAR3031-94-5
Average338.2112Da
Monoisotopic338.062749988Da

Displaying 1–10 of 373 metabolites